Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm44357-201ENSMUST00000195897 142 ntBASIC16.41■□□□□ 0.22
VcanQ62059 Gm19658-201ENSMUST00000196231 138 ntBASIC16.41■□□□□ 0.22
VcanQ62059 Gm44367-201ENSMUST00000196836 138 ntBASIC16.41■□□□□ 0.22
VcanQ62059 Gm44350-201ENSMUST00000197197 138 ntBASIC16.41■□□□□ 0.22
VcanQ62059 Gm44390-201ENSMUST00000197533 144 ntBASIC16.41■□□□□ 0.22
VcanQ62059 Gm44313-201ENSMUST00000198018 138 ntBASIC16.41■□□□□ 0.22
VcanQ62059 Gm44486-201ENSMUST00000198508 138 ntBASIC16.41■□□□□ 0.22
VcanQ62059 Gm44454-201ENSMUST00000198541 138 ntBASIC16.41■□□□□ 0.22
VcanQ62059 Gm44314-201ENSMUST00000199263 138 ntBASIC16.41■□□□□ 0.22
VcanQ62059 Gm44394-201ENSMUST00000199558 138 ntBASIC16.41■□□□□ 0.22
VcanQ62059 Gm44484-201ENSMUST00000199873 138 ntBASIC16.41■□□□□ 0.22
VcanQ62059 Gm44466-201ENSMUST00000200264 138 ntBASIC16.41■□□□□ 0.22
VcanQ62059 Gm44359-201ENSMUST00000200671 138 ntBASIC16.41■□□□□ 0.22
VcanQ62059 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.41■□□□□ 0.22
VcanQ62059 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
VcanQ62059 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
VcanQ62059 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.4■□□□□ 0.22
VcanQ62059 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VcanQ62059 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
VcanQ62059 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VcanQ62059 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.4■□□□□ 0.22
VcanQ62059 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
VcanQ62059 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VcanQ62059 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
VcanQ62059 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VcanQ62059 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VcanQ62059 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VcanQ62059 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VcanQ62059 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VcanQ62059 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VcanQ62059 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.39■□□□□ 0.21
VcanQ62059 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VcanQ62059 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VcanQ62059 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VcanQ62059 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VcanQ62059 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VcanQ62059 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VcanQ62059 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VcanQ62059 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
VcanQ62059 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VcanQ62059 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VcanQ62059 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
VcanQ62059 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.39■□□□□ 0.21
VcanQ62059 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.39■□□□□ 0.21
VcanQ62059 Psmb5-202ENSMUST00000227257 622 ntBASIC16.39■□□□□ 0.21
VcanQ62059 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
VcanQ62059 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VcanQ62059 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VcanQ62059 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VcanQ62059 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VcanQ62059 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
VcanQ62059 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VcanQ62059 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VcanQ62059 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VcanQ62059 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VcanQ62059 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
VcanQ62059 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.38■□□□□ 0.21
VcanQ62059 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
VcanQ62059 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
VcanQ62059 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
VcanQ62059 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VcanQ62059 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.38■□□□□ 0.21
VcanQ62059 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VcanQ62059 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.38■□□□□ 0.21
VcanQ62059 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VcanQ62059 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VcanQ62059 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VcanQ62059 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VcanQ62059 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
VcanQ62059 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VcanQ62059 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VcanQ62059 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.37■□□□□ 0.21
VcanQ62059 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
VcanQ62059 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VcanQ62059 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
VcanQ62059 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VcanQ62059 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
VcanQ62059 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
VcanQ62059 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.37■□□□□ 0.21
VcanQ62059 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VcanQ62059 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VcanQ62059 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
VcanQ62059 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VcanQ62059 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VcanQ62059 Gm7862-201ENSMUST00000121461 292 ntBASIC16.37■□□□□ 0.21
VcanQ62059 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.37■□□□□ 0.21
VcanQ62059 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
VcanQ62059 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
VcanQ62059 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
VcanQ62059 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VcanQ62059 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
VcanQ62059 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
VcanQ62059 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
VcanQ62059 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
VcanQ62059 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.36■□□□□ 0.21
VcanQ62059 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VcanQ62059 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VcanQ62059 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VcanQ62059 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VcanQ62059 Gm15165-201ENSMUST00000118140 502 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms