Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Gli3Q61602 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Gli3Q61602 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Gli3Q61602 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC23.71■■□□□ 1.39
Gli3Q61602 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC23.71■■□□□ 1.39
Gli3Q61602 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Gli3Q61602 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Gli3Q61602 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Gli3Q61602 Gm20634-201ENSMUST00000090779 2956 ntBASIC23.71■■□□□ 1.39
Gli3Q61602 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Gli3Q61602 Hsf1-204ENSMUST00000226872 2104 ntBASIC23.71■■□□□ 1.39
Gli3Q61602 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Gli3Q61602 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Gli3Q61602 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Gli3Q61602 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Gli3Q61602 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Gli3Q61602 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Gli3Q61602 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Gli3Q61602 Gm6277-202ENSMUST00000224036 2779 ntBASIC23.7■■□□□ 1.38
Gli3Q61602 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC23.7■■□□□ 1.38
Gli3Q61602 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Gli3Q61602 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Gli3Q61602 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Gli3Q61602 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC23.69■■□□□ 1.38
Gli3Q61602 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC23.69■■□□□ 1.38
Gli3Q61602 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Gli3Q61602 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
Gli3Q61602 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Gli3Q61602 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
Gli3Q61602 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Gli3Q61602 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Gli3Q61602 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Gli3Q61602 Gm7230-201ENSMUST00000173026 815 ntBASIC23.69■■□□□ 1.38
Gli3Q61602 Gm27321-201ENSMUST00000185021 205 ntBASIC23.69■■□□□ 1.38
Gli3Q61602 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC23.69■■□□□ 1.38
Gli3Q61602 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC23.69■■□□□ 1.38
Gli3Q61602 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Gli3Q61602 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Gli3Q61602 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Gli3Q61602 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Gli3Q61602 Gm18856-201ENSMUST00000178096 1374 ntBASIC23.68■■□□□ 1.38
Gli3Q61602 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Gli3Q61602 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC23.68■■□□□ 1.38
Gli3Q61602 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC23.68■■□□□ 1.38
Gli3Q61602 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Gli3Q61602 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC23.68■■□□□ 1.38
Gli3Q61602 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Gli3Q61602 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Gli3Q61602 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Gli3Q61602 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Gli3Q61602 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Gli3Q61602 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC23.67■■□□□ 1.38
Gli3Q61602 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Gli3Q61602 AC151286.1-201ENSMUST00000198489 145 ntBASIC23.67■■□□□ 1.38
Gli3Q61602 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Gli3Q61602 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Gli3Q61602 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Gli3Q61602 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Gli3Q61602 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Gli3Q61602 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Gli3Q61602 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Gli3Q61602 Gm25990-201ENSMUST00000102440 86 ntBASIC23.66■■□□□ 1.38
Gli3Q61602 Gm15165-201ENSMUST00000118140 502 ntBASIC23.66■■□□□ 1.38
Gli3Q61602 Gm11336-201ENSMUST00000118168 334 ntBASIC23.66■■□□□ 1.38
Gli3Q61602 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Gli3Q61602 Gm43935-201ENSMUST00000203569 1050 ntBASIC23.66■■□□□ 1.38
Gli3Q61602 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC23.66■■□□□ 1.38
Gli3Q61602 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Gli3Q61602 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Gli3Q61602 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Gli3Q61602 Gm15920-201ENSMUST00000118998 402 ntBASIC23.65■■□□□ 1.38
Gli3Q61602 Gm26308-201ENSMUST00000157768 69 ntBASIC23.65■■□□□ 1.38
Gli3Q61602 Gm9727-201ENSMUST00000161387 555 ntBASIC23.65■■□□□ 1.38
Gli3Q61602 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC23.65■■□□□ 1.38
Gli3Q61602 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC23.65■■□□□ 1.38
Gli3Q61602 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC23.65■■□□□ 1.38
Gli3Q61602 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Gli3Q61602 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Gli3Q61602 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
Gli3Q61602 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Gli3Q61602 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Gli3Q61602 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Gli3Q61602 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Gli3Q61602 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Gli3Q61602 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Gli3Q61602 AC121961.1-201ENSMUST00000218594 1779 ntBASIC23.65■■□□□ 1.38
Gli3Q61602 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC23.65■■□□□ 1.38
Gli3Q61602 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Gli3Q61602 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Gli3Q61602 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC23.65■■□□□ 1.38
Gli3Q61602 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC23.65■■□□□ 1.38
Gli3Q61602 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
Gli3Q61602 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC23.64■■□□□ 1.37
Gli3Q61602 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
Gli3Q61602 AC154222.1-201ENSMUST00000223882 475 ntBASIC23.64■■□□□ 1.37
Gli3Q61602 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Gli3Q61602 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
Gli3Q61602 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Gli3Q61602 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Gli3Q61602 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms