Protein–RNA interactions for Protein: Q61488

Dhh, Desert hedgehog protein, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DhhQ61488 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DhhQ61488 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DhhQ61488 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DhhQ61488 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.32■□□□□ 0.04
DhhQ61488 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DhhQ61488 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
DhhQ61488 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
DhhQ61488 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.32■□□□□ 0.04
DhhQ61488 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
DhhQ61488 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.31■□□□□ 0.04
DhhQ61488 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DhhQ61488 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
DhhQ61488 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.31■□□□□ 0.04
DhhQ61488 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
DhhQ61488 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.31■□□□□ 0.04
DhhQ61488 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DhhQ61488 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DhhQ61488 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DhhQ61488 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
DhhQ61488 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
DhhQ61488 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DhhQ61488 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DhhQ61488 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
DhhQ61488 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DhhQ61488 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
DhhQ61488 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
DhhQ61488 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
DhhQ61488 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.3■□□□□ 0.04
DhhQ61488 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
DhhQ61488 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
DhhQ61488 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DhhQ61488 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DhhQ61488 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DhhQ61488 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DhhQ61488 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DhhQ61488 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
DhhQ61488 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DhhQ61488 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.29■□□□□ 0.04
DhhQ61488 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
DhhQ61488 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
DhhQ61488 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DhhQ61488 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.29■□□□□ 0.04
DhhQ61488 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DhhQ61488 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
DhhQ61488 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DhhQ61488 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.29■□□□□ 0.04
DhhQ61488 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DhhQ61488 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DhhQ61488 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.29■□□□□ 0.04
DhhQ61488 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DhhQ61488 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DhhQ61488 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DhhQ61488 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DhhQ61488 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
DhhQ61488 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
DhhQ61488 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
DhhQ61488 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
DhhQ61488 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DhhQ61488 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DhhQ61488 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
DhhQ61488 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.28■□□□□ 0.04
DhhQ61488 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
DhhQ61488 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DhhQ61488 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
DhhQ61488 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
DhhQ61488 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.28■□□□□ 0.04
DhhQ61488 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DhhQ61488 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DhhQ61488 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
DhhQ61488 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DhhQ61488 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.28■□□□□ 0.04
DhhQ61488 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DhhQ61488 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DhhQ61488 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
DhhQ61488 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DhhQ61488 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DhhQ61488 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DhhQ61488 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
DhhQ61488 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DhhQ61488 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
DhhQ61488 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DhhQ61488 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DhhQ61488 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.27■□□□□ 0.04
DhhQ61488 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
DhhQ61488 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
DhhQ61488 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
DhhQ61488 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
DhhQ61488 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
DhhQ61488 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
DhhQ61488 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
DhhQ61488 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.27■□□□□ 0.04
DhhQ61488 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DhhQ61488 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DhhQ61488 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.27■□□□□ 0.03
DhhQ61488 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
DhhQ61488 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
DhhQ61488 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DhhQ61488 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DhhQ61488 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DhhQ61488 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms