Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.15■□□□□ 0.66
Cln3Q61124 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cln3Q61124 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cln3Q61124 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cln3Q61124 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cln3Q61124 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cln3Q61124 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cln3Q61124 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
Cln3Q61124 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cln3Q61124 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cln3Q61124 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cln3Q61124 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Cln3Q61124 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.14■□□□□ 0.65
Cln3Q61124 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cln3Q61124 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cln3Q61124 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Cln3Q61124 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cln3Q61124 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.14■□□□□ 0.65
Cln3Q61124 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.14■□□□□ 0.65
Cln3Q61124 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Cln3Q61124 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cln3Q61124 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Cln3Q61124 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cln3Q61124 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cln3Q61124 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.14■□□□□ 0.65
Cln3Q61124 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cln3Q61124 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cln3Q61124 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.13■□□□□ 0.65
Cln3Q61124 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cln3Q61124 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cln3Q61124 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.13■□□□□ 0.65
Cln3Q61124 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cln3Q61124 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC19.13■□□□□ 0.65
Cln3Q61124 Mir3081-201ENSMUST00000175305 84 ntBASIC19.13■□□□□ 0.65
Cln3Q61124 Gm27742-201ENSMUST00000184667 60 ntBASIC19.13■□□□□ 0.65
Cln3Q61124 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cln3Q61124 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cln3Q61124 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cln3Q61124 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cln3Q61124 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.13■□□□□ 0.65
Cln3Q61124 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cln3Q61124 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.13■□□□□ 0.65
Cln3Q61124 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cln3Q61124 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cln3Q61124 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cln3Q61124 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cln3Q61124 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cln3Q61124 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.12■□□□□ 0.65
Cln3Q61124 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.12■□□□□ 0.65
Cln3Q61124 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cln3Q61124 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cln3Q61124 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.12■□□□□ 0.65
Cln3Q61124 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.12■□□□□ 0.65
Cln3Q61124 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cln3Q61124 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cln3Q61124 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Cln3Q61124 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cln3Q61124 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cln3Q61124 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cln3Q61124 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cln3Q61124 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cln3Q61124 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.11■□□□□ 0.65
Cln3Q61124 Gm27357-201ENSMUST00000183754 135 ntBASIC19.11■□□□□ 0.65
Cln3Q61124 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cln3Q61124 Grk6-206ENSMUST00000224995 2971 ntBASIC19.11■□□□□ 0.65
Cln3Q61124 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cln3Q61124 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cln3Q61124 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Cln3Q61124 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cln3Q61124 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cln3Q61124 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.11■□□□□ 0.65
Cln3Q61124 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cln3Q61124 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cln3Q61124 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cln3Q61124 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Cln3Q61124 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Cln3Q61124 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Cln3Q61124 Gm7153-201ENSMUST00000117092 455 ntBASIC19.1■□□□□ 0.65
Cln3Q61124 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cln3Q61124 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cln3Q61124 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cln3Q61124 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Cln3Q61124 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.1■□□□□ 0.65
Cln3Q61124 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cln3Q61124 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cln3Q61124 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Cln3Q61124 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cln3Q61124 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cln3Q61124 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cln3Q61124 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cln3Q61124 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cln3Q61124 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Cln3Q61124 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cln3Q61124 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
Cln3Q61124 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cln3Q61124 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cln3Q61124 Olfr129-201ENSMUST00000122318 993 ntBASIC19.09■□□□□ 0.65
Cln3Q61124 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.09■□□□□ 0.65
Cln3Q61124 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
Cln3Q61124 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms