Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col12a1Q60847 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.28■□□□□ 0.36
Col12a1Q60847 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col12a1Q60847 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col12a1Q60847 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col12a1Q60847 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Col12a1Q60847 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col12a1Q60847 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col12a1Q60847 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col12a1Q60847 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col12a1Q60847 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col12a1Q60847 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col12a1Q60847 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Col12a1Q60847 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col12a1Q60847 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col12a1Q60847 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col12a1Q60847 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Col12a1Q60847 Gm14822-201ENSMUST00000122247 291 ntBASIC17.27■□□□□ 0.36
Col12a1Q60847 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Col12a1Q60847 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col12a1Q60847 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col12a1Q60847 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col12a1Q60847 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Col12a1Q60847 Gm15467-201ENSMUST00000120582 445 ntBASIC17.27■□□□□ 0.35
Col12a1Q60847 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Col12a1Q60847 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Col12a1Q60847 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col12a1Q60847 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col12a1Q60847 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Col12a1Q60847 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Col12a1Q60847 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col12a1Q60847 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Col12a1Q60847 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.26■□□□□ 0.35
Col12a1Q60847 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.26■□□□□ 0.35
Col12a1Q60847 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col12a1Q60847 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col12a1Q60847 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.26■□□□□ 0.35
Col12a1Q60847 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Col12a1Q60847 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Col12a1Q60847 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col12a1Q60847 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.26■□□□□ 0.35
Col12a1Q60847 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.26■□□□□ 0.35
Col12a1Q60847 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col12a1Q60847 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Col12a1Q60847 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Col12a1Q60847 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col12a1Q60847 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col12a1Q60847 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col12a1Q60847 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col12a1Q60847 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Col12a1Q60847 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.25■□□□□ 0.35
Col12a1Q60847 Psmb5-202ENSMUST00000227257 622 ntBASIC17.25■□□□□ 0.35
Col12a1Q60847 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col12a1Q60847 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col12a1Q60847 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col12a1Q60847 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col12a1Q60847 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col12a1Q60847 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.25■□□□□ 0.35
Col12a1Q60847 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Col12a1Q60847 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.25■□□□□ 0.35
Col12a1Q60847 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.25■□□□□ 0.35
Col12a1Q60847 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Col12a1Q60847 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col12a1Q60847 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.25■□□□□ 0.35
Col12a1Q60847 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.25■□□□□ 0.35
Col12a1Q60847 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col12a1Q60847 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col12a1Q60847 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col12a1Q60847 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Col12a1Q60847 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col12a1Q60847 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.24■□□□□ 0.35
Col12a1Q60847 Gm25911-201ENSMUST00000157621 56 ntBASIC17.24■□□□□ 0.35
Col12a1Q60847 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.24■□□□□ 0.35
Col12a1Q60847 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col12a1Q60847 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col12a1Q60847 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col12a1Q60847 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.23■□□□□ 0.35
Col12a1Q60847 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Col12a1Q60847 Gm5186-201ENSMUST00000218781 920 ntBASIC17.23■□□□□ 0.35
Col12a1Q60847 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Col12a1Q60847 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Col12a1Q60847 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.23■□□□□ 0.35
Col12a1Q60847 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col12a1Q60847 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Col12a1Q60847 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col12a1Q60847 Gm14057-201ENSMUST00000120631 482 ntBASIC17.23■□□□□ 0.35
Col12a1Q60847 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col12a1Q60847 Gm10576-201ENSMUST00000191927 825 ntBASIC17.23■□□□□ 0.35
Col12a1Q60847 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.23■□□□□ 0.35
Col12a1Q60847 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Col12a1Q60847 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col12a1Q60847 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col12a1Q60847 Gm12644-201ENSMUST00000119935 606 ntBASIC17.23■□□□□ 0.35
Col12a1Q60847 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col12a1Q60847 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col12a1Q60847 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col12a1Q60847 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col12a1Q60847 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
Col12a1Q60847 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Col12a1Q60847 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms