Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim38Q5SZ99 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim38Q5SZ99 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trim38Q5SZ99 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trim38Q5SZ99 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.07■□□□□ 0.48
Trim38Q5SZ99 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim38Q5SZ99 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim38Q5SZ99 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim38Q5SZ99 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim38Q5SZ99 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim38Q5SZ99 Trmt13-210ENSMUST00000198454 880 ntBASIC18.07■□□□□ 0.48
Trim38Q5SZ99 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim38Q5SZ99 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim38Q5SZ99 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Trim38Q5SZ99 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Trim38Q5SZ99 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim38Q5SZ99 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim38Q5SZ99 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.07■□□□□ 0.48
Trim38Q5SZ99 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trim38Q5SZ99 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim38Q5SZ99 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim38Q5SZ99 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim38Q5SZ99 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trim38Q5SZ99 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim38Q5SZ99 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim38Q5SZ99 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim38Q5SZ99 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim38Q5SZ99 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Trim38Q5SZ99 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim38Q5SZ99 Gm37856-201ENSMUST00000191634 999 ntBASIC18.06■□□□□ 0.48
Trim38Q5SZ99 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.06■□□□□ 0.48
Trim38Q5SZ99 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Trim38Q5SZ99 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim38Q5SZ99 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Trim38Q5SZ99 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim38Q5SZ99 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim38Q5SZ99 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim38Q5SZ99 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Trim38Q5SZ99 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim38Q5SZ99 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.05■□□□□ 0.48
Trim38Q5SZ99 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim38Q5SZ99 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim38Q5SZ99 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim38Q5SZ99 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim38Q5SZ99 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.05■□□□□ 0.48
Trim38Q5SZ99 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Trim38Q5SZ99 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.05■□□□□ 0.48
Trim38Q5SZ99 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim38Q5SZ99 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim38Q5SZ99 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim38Q5SZ99 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim38Q5SZ99 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim38Q5SZ99 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim38Q5SZ99 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim38Q5SZ99 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim38Q5SZ99 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Trim38Q5SZ99 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim38Q5SZ99 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim38Q5SZ99 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim38Q5SZ99 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim38Q5SZ99 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim38Q5SZ99 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim38Q5SZ99 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim38Q5SZ99 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.04■□□□□ 0.48
Trim38Q5SZ99 Gm12527-201ENSMUST00000117967 564 ntBASIC18.04■□□□□ 0.48
Trim38Q5SZ99 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim38Q5SZ99 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Trim38Q5SZ99 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim38Q5SZ99 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim38Q5SZ99 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Trim38Q5SZ99 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim38Q5SZ99 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trim38Q5SZ99 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim38Q5SZ99 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.03■□□□□ 0.48
Trim38Q5SZ99 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim38Q5SZ99 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim38Q5SZ99 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.03■□□□□ 0.48
Trim38Q5SZ99 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.03■□□□□ 0.48
Trim38Q5SZ99 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.03■□□□□ 0.48
Trim38Q5SZ99 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.03■□□□□ 0.48
Trim38Q5SZ99 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim38Q5SZ99 Gm42545-201ENSMUST00000202755 922 ntBASIC18.03■□□□□ 0.48
Trim38Q5SZ99 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim38Q5SZ99 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim38Q5SZ99 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim38Q5SZ99 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.03■□□□□ 0.48
Trim38Q5SZ99 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim38Q5SZ99 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim38Q5SZ99 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.03■□□□□ 0.48
Trim38Q5SZ99 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim38Q5SZ99 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim38Q5SZ99 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim38Q5SZ99 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim38Q5SZ99 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Trim38Q5SZ99 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim38Q5SZ99 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim38Q5SZ99 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim38Q5SZ99 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.02■□□□□ 0.48
Trim38Q5SZ99 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Trim38Q5SZ99 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms