Protein–RNA interactions for Protein: Q5SV66

Ccdc42, Coiled-coil domain-containing protein 42, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc42Q5SV66 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc42Q5SV66 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.82■□□□□ 0.6
Ccdc42Q5SV66 Haglr-201ENSMUST00000100000 2085 ntBASIC18.82■□□□□ 0.6
Ccdc42Q5SV66 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
Ccdc42Q5SV66 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.82■□□□□ 0.6
Ccdc42Q5SV66 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ccdc42Q5SV66 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc42Q5SV66 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ccdc42Q5SV66 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc42Q5SV66 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ccdc42Q5SV66 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc42Q5SV66 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc42Q5SV66 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ccdc42Q5SV66 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.81■□□□□ 0.6
Ccdc42Q5SV66 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc42Q5SV66 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ccdc42Q5SV66 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.81■□□□□ 0.6
Ccdc42Q5SV66 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc42Q5SV66 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc42Q5SV66 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.81■□□□□ 0.6
Ccdc42Q5SV66 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc42Q5SV66 Gm29791-202ENSMUST00000207888 369 ntBASIC18.81■□□□□ 0.6
Ccdc42Q5SV66 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc42Q5SV66 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.81■□□□□ 0.6
Ccdc42Q5SV66 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc42Q5SV66 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc42Q5SV66 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc42Q5SV66 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc42Q5SV66 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc42Q5SV66 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc42Q5SV66 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ccdc42Q5SV66 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ccdc42Q5SV66 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ccdc42Q5SV66 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc42Q5SV66 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc42Q5SV66 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc42Q5SV66 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.8■□□□□ 0.6
Ccdc42Q5SV66 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc42Q5SV66 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc42Q5SV66 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc42Q5SV66 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc42Q5SV66 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.8■□□□□ 0.6
Ccdc42Q5SV66 Mir8112-201ENSMUST00000184382 131 ntBASIC18.8■□□□□ 0.6
Ccdc42Q5SV66 Gm10033-202ENSMUST00000211874 928 ntBASIC18.8■□□□□ 0.6
Ccdc42Q5SV66 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc42Q5SV66 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc42Q5SV66 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc42Q5SV66 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc42Q5SV66 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Ccdc42Q5SV66 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc42Q5SV66 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc42Q5SV66 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc42Q5SV66 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc42Q5SV66 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc42Q5SV66 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc42Q5SV66 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.8■□□□□ 0.6
Ccdc42Q5SV66 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.79■□□□□ 0.6
Ccdc42Q5SV66 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ccdc42Q5SV66 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc42Q5SV66 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc42Q5SV66 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc42Q5SV66 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc42Q5SV66 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc42Q5SV66 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ccdc42Q5SV66 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.79■□□□□ 0.6
Ccdc42Q5SV66 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc42Q5SV66 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc42Q5SV66 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc42Q5SV66 Gm18671-201ENSMUST00000214826 683 ntBASIC18.79■□□□□ 0.6
Ccdc42Q5SV66 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc42Q5SV66 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ccdc42Q5SV66 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc42Q5SV66 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc42Q5SV66 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc42Q5SV66 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc42Q5SV66 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc42Q5SV66 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc42Q5SV66 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.78■□□□□ 0.6
Ccdc42Q5SV66 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc42Q5SV66 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc42Q5SV66 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc42Q5SV66 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc42Q5SV66 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc42Q5SV66 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc42Q5SV66 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.78■□□□□ 0.6
Ccdc42Q5SV66 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc42Q5SV66 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.78■□□□□ 0.6
Ccdc42Q5SV66 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc42Q5SV66 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc42Q5SV66 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ccdc42Q5SV66 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc42Q5SV66 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Ccdc42Q5SV66 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Ccdc42Q5SV66 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc42Q5SV66 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc42Q5SV66 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc42Q5SV66 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc42Q5SV66 Gm10418-201ENSMUST00000100943 576 ntBASIC18.77■□□□□ 0.6
Ccdc42Q5SV66 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc42Q5SV66 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms