Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav2Q5R1I9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav2Q5R1I9 Gm37374-201ENSMUST00000194954 1829 ntBASIC13.9□□□□□ -0.18
Trav2Q5R1I9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav2Q5R1I9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav2Q5R1I9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav2Q5R1I9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav2Q5R1I9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav2Q5R1I9 Gm37820-201ENSMUST00000194021 2147 ntBASIC13.9□□□□□ -0.18
Trav2Q5R1I9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav2Q5R1I9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav2Q5R1I9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav2Q5R1I9 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav2Q5R1I9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav2Q5R1I9 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav2Q5R1I9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav2Q5R1I9 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.9□□□□□ -0.18
Trav2Q5R1I9 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.9□□□□□ -0.18
Trav2Q5R1I9 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.9□□□□□ -0.18
Trav2Q5R1I9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav2Q5R1I9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav2Q5R1I9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav2Q5R1I9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav2Q5R1I9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav2Q5R1I9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav2Q5R1I9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav2Q5R1I9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav2Q5R1I9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav2Q5R1I9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav2Q5R1I9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav2Q5R1I9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav2Q5R1I9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav2Q5R1I9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav2Q5R1I9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav2Q5R1I9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav2Q5R1I9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav2Q5R1I9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav2Q5R1I9 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.89□□□□□ -0.19
Trav2Q5R1I9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav2Q5R1I9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.89□□□□□ -0.19
Trav2Q5R1I9 Gm11539-201ENSMUST00000119837 557 ntBASIC13.89□□□□□ -0.19
Trav2Q5R1I9 Gm13436-201ENSMUST00000120418 567 ntBASIC13.89□□□□□ -0.19
Trav2Q5R1I9 Gm13559-201ENSMUST00000120476 863 ntBASIC13.89□□□□□ -0.19
Trav2Q5R1I9 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Trav2Q5R1I9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav2Q5R1I9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav2Q5R1I9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav2Q5R1I9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav2Q5R1I9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav2Q5R1I9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav2Q5R1I9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav2Q5R1I9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav2Q5R1I9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav2Q5R1I9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav2Q5R1I9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav2Q5R1I9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav2Q5R1I9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav2Q5R1I9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav2Q5R1I9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.88□□□□□ -0.19
Trav2Q5R1I9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav2Q5R1I9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav2Q5R1I9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav2Q5R1I9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav2Q5R1I9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav2Q5R1I9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav2Q5R1I9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Trav2Q5R1I9 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav2Q5R1I9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav2Q5R1I9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav2Q5R1I9 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav2Q5R1I9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav2Q5R1I9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav2Q5R1I9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav2Q5R1I9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav2Q5R1I9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav2Q5R1I9 Gm8668-201ENSMUST00000120559 1447 ntBASIC13.88□□□□□ -0.19
Trav2Q5R1I9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trav2Q5R1I9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav2Q5R1I9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav2Q5R1I9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav2Q5R1I9 Gm45606-201ENSMUST00000209836 2795 ntBASIC13.88□□□□□ -0.19
Trav2Q5R1I9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav2Q5R1I9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav2Q5R1I9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav2Q5R1I9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav2Q5R1I9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav2Q5R1I9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav2Q5R1I9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav2Q5R1I9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav2Q5R1I9 Gm35558-201ENSMUST00000222675 2219 ntBASIC13.87□□□□□ -0.19
Trav2Q5R1I9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav2Q5R1I9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav2Q5R1I9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav2Q5R1I9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav2Q5R1I9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav2Q5R1I9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav2Q5R1I9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC13.87□□□□□ -0.19
Trav2Q5R1I9 Gm7977-201ENSMUST00000193787 748 ntBASIC13.87□□□□□ -0.19
Trav2Q5R1I9 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav2Q5R1I9 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms