Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.59□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC13.59□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Gm9988-201ENSMUST00000069786 435 ntBASIC13.58□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.57□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Reep4-203ENSMUST00000226563 1444 ntBASIC13.56□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.56□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms