Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav8d-2Q5R1B6 Gm15794-201ENSMUST00000120182 631 ntBASIC16.98■□□□□ 0.31
Trav8d-2Q5R1B6 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav8d-2Q5R1B6 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav8d-2Q5R1B6 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav8d-2Q5R1B6 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trav8d-2Q5R1B6 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav8d-2Q5R1B6 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trav8d-2Q5R1B6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav8d-2Q5R1B6 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trav8d-2Q5R1B6 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trav8d-2Q5R1B6 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trav8d-2Q5R1B6 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav8d-2Q5R1B6 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav8d-2Q5R1B6 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav8d-2Q5R1B6 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trav8d-2Q5R1B6 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav8d-2Q5R1B6 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav8d-2Q5R1B6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav8d-2Q5R1B6 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav8d-2Q5R1B6 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trav8d-2Q5R1B6 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.97■□□□□ 0.31
Trav8d-2Q5R1B6 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.97■□□□□ 0.31
Trav8d-2Q5R1B6 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.97■□□□□ 0.31
Trav8d-2Q5R1B6 Gm25925-201ENSMUST00000158314 306 ntBASIC16.97■□□□□ 0.31
Trav8d-2Q5R1B6 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav8d-2Q5R1B6 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trav8d-2Q5R1B6 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.97■□□□□ 0.31
Trav8d-2Q5R1B6 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.97■□□□□ 0.31
Trav8d-2Q5R1B6 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.97■□□□□ 0.31
Trav8d-2Q5R1B6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav8d-2Q5R1B6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav8d-2Q5R1B6 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav8d-2Q5R1B6 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.96■□□□□ 0.31
Trav8d-2Q5R1B6 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav8d-2Q5R1B6 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.31
Trav8d-2Q5R1B6 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Trav8d-2Q5R1B6 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav8d-2Q5R1B6 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav8d-2Q5R1B6 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.96■□□□□ 0.31
Trav8d-2Q5R1B6 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trav8d-2Q5R1B6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trav8d-2Q5R1B6 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav8d-2Q5R1B6 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.96■□□□□ 0.31
Trav8d-2Q5R1B6 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav8d-2Q5R1B6 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav8d-2Q5R1B6 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav8d-2Q5R1B6 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav8d-2Q5R1B6 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav8d-2Q5R1B6 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.96■□□□□ 0.31
Trav8d-2Q5R1B6 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav8d-2Q5R1B6 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav8d-2Q5R1B6 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.96■□□□□ 0.3
Trav8d-2Q5R1B6 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav8d-2Q5R1B6 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav8d-2Q5R1B6 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav8d-2Q5R1B6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav8d-2Q5R1B6 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav8d-2Q5R1B6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav8d-2Q5R1B6 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav8d-2Q5R1B6 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav8d-2Q5R1B6 Gm12895-201ENSMUST00000122214 226 ntBASIC16.95■□□□□ 0.3
Trav8d-2Q5R1B6 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav8d-2Q5R1B6 Gm18733-201ENSMUST00000173950 856 ntBASIC16.95■□□□□ 0.3
Trav8d-2Q5R1B6 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.95■□□□□ 0.3
Trav8d-2Q5R1B6 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.95■□□□□ 0.3
Trav8d-2Q5R1B6 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.95■□□□□ 0.3
Trav8d-2Q5R1B6 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav8d-2Q5R1B6 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav8d-2Q5R1B6 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav8d-2Q5R1B6 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Trav8d-2Q5R1B6 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8d-2Q5R1B6 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.94■□□□□ 0.3
Trav8d-2Q5R1B6 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.94■□□□□ 0.3
Trav8d-2Q5R1B6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8d-2Q5R1B6 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trav8d-2Q5R1B6 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8d-2Q5R1B6 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8d-2Q5R1B6 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8d-2Q5R1B6 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.94■□□□□ 0.3
Trav8d-2Q5R1B6 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8d-2Q5R1B6 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8d-2Q5R1B6 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.94■□□□□ 0.3
Trav8d-2Q5R1B6 AW822252-206ENSMUST00000208904 237 ntBASIC16.94■□□□□ 0.3
Trav8d-2Q5R1B6 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8d-2Q5R1B6 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8d-2Q5R1B6 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8d-2Q5R1B6 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8d-2Q5R1B6 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8d-2Q5R1B6 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8d-2Q5R1B6 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8d-2Q5R1B6 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8d-2Q5R1B6 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8d-2Q5R1B6 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.93■□□□□ 0.3
Trav8d-2Q5R1B6 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.93■□□□□ 0.3
Trav8d-2Q5R1B6 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trav8d-2Q5R1B6 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav8d-2Q5R1B6 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.93■□□□□ 0.3
Trav8d-2Q5R1B6 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.93■□□□□ 0.3
Trav8d-2Q5R1B6 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms