Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Scn2bQ56A07 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn2bQ56A07 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn2bQ56A07 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scn2bQ56A07 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn2bQ56A07 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Scn2bQ56A07 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scn2bQ56A07 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.26■□□□□ 0.35
Scn2bQ56A07 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn2bQ56A07 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.26■□□□□ 0.35
Scn2bQ56A07 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn2bQ56A07 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn2bQ56A07 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Scn2bQ56A07 Zfp783-201ENSMUST00000095946 670 ntBASIC17.26■□□□□ 0.35
Scn2bQ56A07 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scn2bQ56A07 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.26■□□□□ 0.35
Scn2bQ56A07 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn2bQ56A07 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn2bQ56A07 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn2bQ56A07 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn2bQ56A07 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn2bQ56A07 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Scn2bQ56A07 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn2bQ56A07 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn2bQ56A07 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn2bQ56A07 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn2bQ56A07 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn2bQ56A07 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn2bQ56A07 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.25■□□□□ 0.35
Scn2bQ56A07 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Scn2bQ56A07 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn2bQ56A07 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Scn2bQ56A07 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn2bQ56A07 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Scn2bQ56A07 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn2bQ56A07 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn2bQ56A07 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Scn2bQ56A07 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Scn2bQ56A07 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn2bQ56A07 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Scn2bQ56A07 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn2bQ56A07 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn2bQ56A07 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn2bQ56A07 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn2bQ56A07 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.24■□□□□ 0.35
Scn2bQ56A07 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn2bQ56A07 Mir8112-201ENSMUST00000184382 131 ntBASIC17.24■□□□□ 0.35
Scn2bQ56A07 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.24■□□□□ 0.35
Scn2bQ56A07 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn2bQ56A07 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Scn2bQ56A07 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn2bQ56A07 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn2bQ56A07 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn2bQ56A07 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Scn2bQ56A07 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Scn2bQ56A07 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn2bQ56A07 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Scn2bQ56A07 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn2bQ56A07 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Scn2bQ56A07 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Scn2bQ56A07 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn2bQ56A07 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn2bQ56A07 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scn2bQ56A07 Gm2399-201ENSMUST00000104944 225 ntBASIC17.23■□□□□ 0.35
Scn2bQ56A07 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Scn2bQ56A07 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.23■□□□□ 0.35
Scn2bQ56A07 Gm44549-201ENSMUST00000208351 577 ntBASIC17.23■□□□□ 0.35
Scn2bQ56A07 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.23■□□□□ 0.35
Scn2bQ56A07 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn2bQ56A07 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn2bQ56A07 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn2bQ56A07 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Scn2bQ56A07 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scn2bQ56A07 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Scn2bQ56A07 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn2bQ56A07 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scn2bQ56A07 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn2bQ56A07 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scn2bQ56A07 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn2bQ56A07 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn2bQ56A07 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scn2bQ56A07 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Scn2bQ56A07 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.22■□□□□ 0.35
Scn2bQ56A07 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn2bQ56A07 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn2bQ56A07 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn2bQ56A07 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scn2bQ56A07 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn2bQ56A07 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn2bQ56A07 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scn2bQ56A07 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scn2bQ56A07 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn2bQ56A07 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn2bQ56A07 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn2bQ56A07 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn2bQ56A07 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn2bQ56A07 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Scn2bQ56A07 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn2bQ56A07 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn2bQ56A07 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms