Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.14■□□□□ 0.81
Rc3h1Q4VGL6 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rc3h1Q4VGL6 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.14■□□□□ 0.81
Rc3h1Q4VGL6 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rc3h1Q4VGL6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rc3h1Q4VGL6 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rc3h1Q4VGL6 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rc3h1Q4VGL6 Il3ra-202ENSMUST00000223589 738 ntBASIC20.14■□□□□ 0.81
Rc3h1Q4VGL6 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Rc3h1Q4VGL6 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rc3h1Q4VGL6 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rc3h1Q4VGL6 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rc3h1Q4VGL6 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rc3h1Q4VGL6 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.13■□□□□ 0.81
Rc3h1Q4VGL6 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.13■□□□□ 0.81
Rc3h1Q4VGL6 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rc3h1Q4VGL6 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rc3h1Q4VGL6 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rc3h1Q4VGL6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rc3h1Q4VGL6 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rc3h1Q4VGL6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rc3h1Q4VGL6 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rc3h1Q4VGL6 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Rc3h1Q4VGL6 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rc3h1Q4VGL6 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Rc3h1Q4VGL6 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Rc3h1Q4VGL6 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.12■□□□□ 0.81
Rc3h1Q4VGL6 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rc3h1Q4VGL6 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.12■□□□□ 0.81
Rc3h1Q4VGL6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rc3h1Q4VGL6 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Rc3h1Q4VGL6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.12■□□□□ 0.81
Rc3h1Q4VGL6 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.12■□□□□ 0.81
Rc3h1Q4VGL6 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
Rc3h1Q4VGL6 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rc3h1Q4VGL6 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rc3h1Q4VGL6 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rc3h1Q4VGL6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Rc3h1Q4VGL6 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.11■□□□□ 0.81
Rc3h1Q4VGL6 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rc3h1Q4VGL6 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.11■□□□□ 0.81
Rc3h1Q4VGL6 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.11■□□□□ 0.81
Rc3h1Q4VGL6 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rc3h1Q4VGL6 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Rc3h1Q4VGL6 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rc3h1Q4VGL6 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rc3h1Q4VGL6 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rc3h1Q4VGL6 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rc3h1Q4VGL6 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rc3h1Q4VGL6 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rc3h1Q4VGL6 Gm17661-201ENSMUST00000170317 270 ntBASIC20.1■□□□□ 0.81
Rc3h1Q4VGL6 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rc3h1Q4VGL6 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rc3h1Q4VGL6 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rc3h1Q4VGL6 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.1■□□□□ 0.81
Rc3h1Q4VGL6 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rc3h1Q4VGL6 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rc3h1Q4VGL6 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.09■□□□□ 0.81
Rc3h1Q4VGL6 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.09■□□□□ 0.81
Rc3h1Q4VGL6 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rc3h1Q4VGL6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rc3h1Q4VGL6 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rc3h1Q4VGL6 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rc3h1Q4VGL6 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rc3h1Q4VGL6 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rc3h1Q4VGL6 Gm16061-201ENSMUST00000122167 857 ntBASIC20.09■□□□□ 0.81
Rc3h1Q4VGL6 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.09■□□□□ 0.81
Rc3h1Q4VGL6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rc3h1Q4VGL6 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rc3h1Q4VGL6 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rc3h1Q4VGL6 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rc3h1Q4VGL6 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Rc3h1Q4VGL6 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.08■□□□□ 0.81
Rc3h1Q4VGL6 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rc3h1Q4VGL6 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rc3h1Q4VGL6 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rc3h1Q4VGL6 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rc3h1Q4VGL6 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rc3h1Q4VGL6 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.08■□□□□ 0.81
Rc3h1Q4VGL6 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rc3h1Q4VGL6 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rc3h1Q4VGL6 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rc3h1Q4VGL6 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Rc3h1Q4VGL6 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rc3h1Q4VGL6 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Rc3h1Q4VGL6 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rc3h1Q4VGL6 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rc3h1Q4VGL6 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Rc3h1Q4VGL6 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rc3h1Q4VGL6 Gm23634-201ENSMUST00000175071 91 ntBASIC20.07■□□□□ 0.8
Rc3h1Q4VGL6 Gm22697-201ENSMUST00000175194 63 ntBASIC20.07■□□□□ 0.8
Rc3h1Q4VGL6 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.07■□□□□ 0.8
Rc3h1Q4VGL6 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rc3h1Q4VGL6 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rc3h1Q4VGL6 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Rc3h1Q4VGL6 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.07■□□□□ 0.8
Rc3h1Q4VGL6 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rc3h1Q4VGL6 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.07■□□□□ 0.8
Rc3h1Q4VGL6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rc3h1Q4VGL6 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms