Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Syne3Q4FZC9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Syne3Q4FZC9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Syne3Q4FZC9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Syne3Q4FZC9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Syne3Q4FZC9 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.49■□□□□ 0.55
Syne3Q4FZC9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syne3Q4FZC9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Syne3Q4FZC9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syne3Q4FZC9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syne3Q4FZC9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syne3Q4FZC9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syne3Q4FZC9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Syne3Q4FZC9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.49■□□□□ 0.55
Syne3Q4FZC9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.49■□□□□ 0.55
Syne3Q4FZC9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syne3Q4FZC9 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.49■□□□□ 0.55
Syne3Q4FZC9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syne3Q4FZC9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Syne3Q4FZC9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.49■□□□□ 0.55
Syne3Q4FZC9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syne3Q4FZC9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syne3Q4FZC9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syne3Q4FZC9 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syne3Q4FZC9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Syne3Q4FZC9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syne3Q4FZC9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Syne3Q4FZC9 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.48■□□□□ 0.55
Syne3Q4FZC9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Syne3Q4FZC9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Syne3Q4FZC9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Syne3Q4FZC9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Syne3Q4FZC9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Syne3Q4FZC9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Syne3Q4FZC9 Gm22240-201ENSMUST00000175225 82 ntBASIC18.48■□□□□ 0.55
Syne3Q4FZC9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.48■□□□□ 0.55
Syne3Q4FZC9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Syne3Q4FZC9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Syne3Q4FZC9 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Syne3Q4FZC9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Syne3Q4FZC9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Syne3Q4FZC9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Syne3Q4FZC9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Syne3Q4FZC9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Syne3Q4FZC9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.48■□□□□ 0.55
Syne3Q4FZC9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Syne3Q4FZC9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Syne3Q4FZC9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Syne3Q4FZC9 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Syne3Q4FZC9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Syne3Q4FZC9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Syne3Q4FZC9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Syne3Q4FZC9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Syne3Q4FZC9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Syne3Q4FZC9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Syne3Q4FZC9 Gm15375-201ENSMUST00000119510 849 ntBASIC18.47■□□□□ 0.55
Syne3Q4FZC9 Mir6349-201ENSMUST00000184059 97 ntBASIC18.47■□□□□ 0.55
Syne3Q4FZC9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Syne3Q4FZC9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Syne3Q4FZC9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Syne3Q4FZC9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Syne3Q4FZC9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Syne3Q4FZC9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.47■□□□□ 0.55
Syne3Q4FZC9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Syne3Q4FZC9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Syne3Q4FZC9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.46■□□□□ 0.55
Syne3Q4FZC9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
Syne3Q4FZC9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Syne3Q4FZC9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Syne3Q4FZC9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Syne3Q4FZC9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Syne3Q4FZC9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.46■□□□□ 0.55
Syne3Q4FZC9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.46■□□□□ 0.55
Syne3Q4FZC9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Syne3Q4FZC9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Syne3Q4FZC9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Syne3Q4FZC9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Syne3Q4FZC9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Syne3Q4FZC9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Syne3Q4FZC9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Syne3Q4FZC9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Syne3Q4FZC9 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Syne3Q4FZC9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Syne3Q4FZC9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Syne3Q4FZC9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Syne3Q4FZC9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Syne3Q4FZC9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Syne3Q4FZC9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Syne3Q4FZC9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Syne3Q4FZC9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Syne3Q4FZC9 Gm15378-201ENSMUST00000121894 207 ntBASIC18.45■□□□□ 0.54
Syne3Q4FZC9 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.45■□□□□ 0.54
Syne3Q4FZC9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Syne3Q4FZC9 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Syne3Q4FZC9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Syne3Q4FZC9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Syne3Q4FZC9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Syne3Q4FZC9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Syne3Q4FZC9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Syne3Q4FZC9 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms