Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Gm22697-201ENSMUST00000175194 63 ntBASIC20.33■□□□□ 0.85
Prpf38aQ4FK66 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Prpf38aQ4FK66 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Prpf38aQ4FK66 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Prpf38aQ4FK66 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Prpf38aQ4FK66 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
Prpf38aQ4FK66 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Prpf38aQ4FK66 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Prpf38aQ4FK66 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.33■□□□□ 0.84
Prpf38aQ4FK66 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf38aQ4FK66 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf38aQ4FK66 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf38aQ4FK66 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Prpf38aQ4FK66 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf38aQ4FK66 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf38aQ4FK66 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Prpf38aQ4FK66 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf38aQ4FK66 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf38aQ4FK66 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf38aQ4FK66 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf38aQ4FK66 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf38aQ4FK66 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf38aQ4FK66 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf38aQ4FK66 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf38aQ4FK66 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf38aQ4FK66 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf38aQ4FK66 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf38aQ4FK66 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Prpf38aQ4FK66 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf38aQ4FK66 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Prpf38aQ4FK66 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf38aQ4FK66 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Prpf38aQ4FK66 Gm18101-201ENSMUST00000215769 548 ntBASIC20.31■□□□□ 0.84
Prpf38aQ4FK66 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.31■□□□□ 0.84
Prpf38aQ4FK66 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf38aQ4FK66 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Prpf38aQ4FK66 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf38aQ4FK66 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf38aQ4FK66 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf38aQ4FK66 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf38aQ4FK66 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Prpf38aQ4FK66 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.31■□□□□ 0.84
Prpf38aQ4FK66 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf38aQ4FK66 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf38aQ4FK66 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf38aQ4FK66 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf38aQ4FK66 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf38aQ4FK66 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf38aQ4FK66 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf38aQ4FK66 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf38aQ4FK66 Gm23634-201ENSMUST00000175071 91 ntBASIC20.3■□□□□ 0.84
Prpf38aQ4FK66 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Prpf38aQ4FK66 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Prpf38aQ4FK66 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf38aQ4FK66 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf38aQ4FK66 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf38aQ4FK66 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.3■□□□□ 0.84
Prpf38aQ4FK66 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf38aQ4FK66 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf38aQ4FK66 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf38aQ4FK66 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Prpf38aQ4FK66 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Prpf38aQ4FK66 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prpf38aQ4FK66 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Prpf38aQ4FK66 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Prpf38aQ4FK66 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.29■□□□□ 0.84
Prpf38aQ4FK66 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.29■□□□□ 0.84
Prpf38aQ4FK66 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prpf38aQ4FK66 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prpf38aQ4FK66 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prpf38aQ4FK66 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prpf38aQ4FK66 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.28■□□□□ 0.84
Prpf38aQ4FK66 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf38aQ4FK66 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf38aQ4FK66 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf38aQ4FK66 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.28■□□□□ 0.84
Prpf38aQ4FK66 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf38aQ4FK66 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.28■□□□□ 0.84
Prpf38aQ4FK66 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Prpf38aQ4FK66 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf38aQ4FK66 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf38aQ4FK66 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Prpf38aQ4FK66 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf38aQ4FK66 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf38aQ4FK66 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Prpf38aQ4FK66 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.27■□□□□ 0.84
Prpf38aQ4FK66 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Prpf38aQ4FK66 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Prpf38aQ4FK66 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Prpf38aQ4FK66 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prpf38aQ4FK66 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prpf38aQ4FK66 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.27■□□□□ 0.84
Prpf38aQ4FK66 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prpf38aQ4FK66 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Prpf38aQ4FK66 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prpf38aQ4FK66 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.27■□□□□ 0.84
Prpf38aQ4FK66 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prpf38aQ4FK66 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prpf38aQ4FK66 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Prpf38aQ4FK66 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms