Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.2■□□□□ 0.82
Cdkl5Q3UTQ8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdkl5Q3UTQ8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Cdkl5Q3UTQ8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdkl5Q3UTQ8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdkl5Q3UTQ8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdkl5Q3UTQ8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdkl5Q3UTQ8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Cdkl5Q3UTQ8 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdkl5Q3UTQ8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdkl5Q3UTQ8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.2■□□□□ 0.82
Cdkl5Q3UTQ8 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdkl5Q3UTQ8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Cdkl5Q3UTQ8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdkl5Q3UTQ8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Cdkl5Q3UTQ8 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Cdkl5Q3UTQ8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdkl5Q3UTQ8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cdkl5Q3UTQ8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cdkl5Q3UTQ8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdkl5Q3UTQ8 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdkl5Q3UTQ8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdkl5Q3UTQ8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdkl5Q3UTQ8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdkl5Q3UTQ8 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdkl5Q3UTQ8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdkl5Q3UTQ8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Cdkl5Q3UTQ8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Cdkl5Q3UTQ8 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cdkl5Q3UTQ8 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdkl5Q3UTQ8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Cdkl5Q3UTQ8 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cdkl5Q3UTQ8 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdkl5Q3UTQ8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdkl5Q3UTQ8 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdkl5Q3UTQ8 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cdkl5Q3UTQ8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdkl5Q3UTQ8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cdkl5Q3UTQ8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.17■□□□□ 0.82
Cdkl5Q3UTQ8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdkl5Q3UTQ8 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdkl5Q3UTQ8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdkl5Q3UTQ8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdkl5Q3UTQ8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Cdkl5Q3UTQ8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cdkl5Q3UTQ8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdkl5Q3UTQ8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cdkl5Q3UTQ8 Gm4974-201ENSMUST00000209974 875 ntBASIC20.17■□□□□ 0.82
Cdkl5Q3UTQ8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdkl5Q3UTQ8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Cdkl5Q3UTQ8 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdkl5Q3UTQ8 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdkl5Q3UTQ8 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdkl5Q3UTQ8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.17■□□□□ 0.82
Cdkl5Q3UTQ8 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdkl5Q3UTQ8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdkl5Q3UTQ8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdkl5Q3UTQ8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdkl5Q3UTQ8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Cdkl5Q3UTQ8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdkl5Q3UTQ8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.16■□□□□ 0.82
Cdkl5Q3UTQ8 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdkl5Q3UTQ8 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.16■□□□□ 0.82
Cdkl5Q3UTQ8 Gm10698-201ENSMUST00000182663 604 ntBASIC20.16■□□□□ 0.82
Cdkl5Q3UTQ8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdkl5Q3UTQ8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Cdkl5Q3UTQ8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdkl5Q3UTQ8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cdkl5Q3UTQ8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdkl5Q3UTQ8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdkl5Q3UTQ8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdkl5Q3UTQ8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.16■□□□□ 0.82
Cdkl5Q3UTQ8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.15■□□□□ 0.82
Cdkl5Q3UTQ8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdkl5Q3UTQ8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Cdkl5Q3UTQ8 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdkl5Q3UTQ8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdkl5Q3UTQ8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdkl5Q3UTQ8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdkl5Q3UTQ8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.15■□□□□ 0.82
Cdkl5Q3UTQ8 Gm13168-201ENSMUST00000121771 632 ntBASIC20.15■□□□□ 0.82
Cdkl5Q3UTQ8 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdkl5Q3UTQ8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.15■□□□□ 0.82
Cdkl5Q3UTQ8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdkl5Q3UTQ8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdkl5Q3UTQ8 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdkl5Q3UTQ8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cdkl5Q3UTQ8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdkl5Q3UTQ8 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdkl5Q3UTQ8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdkl5Q3UTQ8 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdkl5Q3UTQ8 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cdkl5Q3UTQ8 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdkl5Q3UTQ8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdkl5Q3UTQ8 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.82
Cdkl5Q3UTQ8 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cdkl5Q3UTQ8 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cdkl5Q3UTQ8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.14■□□□□ 0.82
Cdkl5Q3UTQ8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Cdkl5Q3UTQ8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms