Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Naf1Q3UMQ8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Naf1Q3UMQ8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Naf1Q3UMQ8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
Naf1Q3UMQ8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Naf1Q3UMQ8 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Naf1Q3UMQ8 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Naf1Q3UMQ8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Naf1Q3UMQ8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Naf1Q3UMQ8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Naf1Q3UMQ8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.7■□□□□ 0.42
Naf1Q3UMQ8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Naf1Q3UMQ8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.7■□□□□ 0.42
Naf1Q3UMQ8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Naf1Q3UMQ8 Gm7638-201ENSMUST00000121348 967 ntBASIC17.7■□□□□ 0.42
Naf1Q3UMQ8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Naf1Q3UMQ8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.7■□□□□ 0.42
Naf1Q3UMQ8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.7■□□□□ 0.42
Naf1Q3UMQ8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.7■□□□□ 0.42
Naf1Q3UMQ8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Naf1Q3UMQ8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.7■□□□□ 0.42
Naf1Q3UMQ8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Naf1Q3UMQ8 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Naf1Q3UMQ8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Naf1Q3UMQ8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Naf1Q3UMQ8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Naf1Q3UMQ8 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.69■□□□□ 0.42
Naf1Q3UMQ8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Naf1Q3UMQ8 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Naf1Q3UMQ8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Naf1Q3UMQ8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Naf1Q3UMQ8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.69■□□□□ 0.42
Naf1Q3UMQ8 Gm18959-201ENSMUST00000208954 655 ntBASIC17.69■□□□□ 0.42
Naf1Q3UMQ8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.69■□□□□ 0.42
Naf1Q3UMQ8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Naf1Q3UMQ8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Naf1Q3UMQ8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Naf1Q3UMQ8 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Naf1Q3UMQ8 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Naf1Q3UMQ8 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.69■□□□□ 0.42
Naf1Q3UMQ8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Naf1Q3UMQ8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Naf1Q3UMQ8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Naf1Q3UMQ8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Naf1Q3UMQ8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Naf1Q3UMQ8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Naf1Q3UMQ8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Naf1Q3UMQ8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Naf1Q3UMQ8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Naf1Q3UMQ8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Naf1Q3UMQ8 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Naf1Q3UMQ8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Naf1Q3UMQ8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Naf1Q3UMQ8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Naf1Q3UMQ8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Naf1Q3UMQ8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Naf1Q3UMQ8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Naf1Q3UMQ8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Naf1Q3UMQ8 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Naf1Q3UMQ8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Naf1Q3UMQ8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Naf1Q3UMQ8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Naf1Q3UMQ8 Gm7791-201ENSMUST00000219066 539 ntBASIC17.68■□□□□ 0.42
Naf1Q3UMQ8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Naf1Q3UMQ8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Naf1Q3UMQ8 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Naf1Q3UMQ8 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Naf1Q3UMQ8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
Naf1Q3UMQ8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Naf1Q3UMQ8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Naf1Q3UMQ8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Naf1Q3UMQ8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.67■□□□□ 0.42
Naf1Q3UMQ8 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Naf1Q3UMQ8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Naf1Q3UMQ8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Naf1Q3UMQ8 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.67■□□□□ 0.42
Naf1Q3UMQ8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Naf1Q3UMQ8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Naf1Q3UMQ8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Naf1Q3UMQ8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.67■□□□□ 0.42
Naf1Q3UMQ8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Naf1Q3UMQ8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Naf1Q3UMQ8 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Naf1Q3UMQ8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Naf1Q3UMQ8 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Naf1Q3UMQ8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Naf1Q3UMQ8 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Naf1Q3UMQ8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Naf1Q3UMQ8 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Naf1Q3UMQ8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Naf1Q3UMQ8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Naf1Q3UMQ8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Naf1Q3UMQ8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Naf1Q3UMQ8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.66■□□□□ 0.42
Naf1Q3UMQ8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Naf1Q3UMQ8 Gm45058-201ENSMUST00000205810 766 ntBASIC17.66■□□□□ 0.42
Naf1Q3UMQ8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Naf1Q3UMQ8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Naf1Q3UMQ8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Naf1Q3UMQ8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms