Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Khdc4Q3TCX3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Khdc4Q3TCX3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Khdc4Q3TCX3 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Khdc4Q3TCX3 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Khdc4Q3TCX3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Khdc4Q3TCX3 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Khdc4Q3TCX3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Khdc4Q3TCX3 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Khdc4Q3TCX3 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Khdc4Q3TCX3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Khdc4Q3TCX3 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Khdc4Q3TCX3 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Khdc4Q3TCX3 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Khdc4Q3TCX3 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Khdc4Q3TCX3 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Khdc4Q3TCX3 Gm10231-201ENSMUST00000181584 441 ntBASIC16.58■□□□□ 0.24
Khdc4Q3TCX3 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Khdc4Q3TCX3 Gm10175-202ENSMUST00000208752 441 ntBASIC16.58■□□□□ 0.24
Khdc4Q3TCX3 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Khdc4Q3TCX3 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Khdc4Q3TCX3 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Khdc4Q3TCX3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Khdc4Q3TCX3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.58■□□□□ 0.24
Khdc4Q3TCX3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Khdc4Q3TCX3 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.58■□□□□ 0.24
Khdc4Q3TCX3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Khdc4Q3TCX3 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Khdc4Q3TCX3 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Khdc4Q3TCX3 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Khdc4Q3TCX3 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.58■□□□□ 0.24
Khdc4Q3TCX3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Khdc4Q3TCX3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Khdc4Q3TCX3 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Khdc4Q3TCX3 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Khdc4Q3TCX3 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.58■□□□□ 0.24
Khdc4Q3TCX3 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Khdc4Q3TCX3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Khdc4Q3TCX3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Khdc4Q3TCX3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.57■□□□□ 0.24
Khdc4Q3TCX3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Khdc4Q3TCX3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Khdc4Q3TCX3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Khdc4Q3TCX3 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.57■□□□□ 0.24
Khdc4Q3TCX3 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.57■□□□□ 0.24
Khdc4Q3TCX3 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Khdc4Q3TCX3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.57■□□□□ 0.24
Khdc4Q3TCX3 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Khdc4Q3TCX3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Khdc4Q3TCX3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Khdc4Q3TCX3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Khdc4Q3TCX3 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Khdc4Q3TCX3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Khdc4Q3TCX3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Khdc4Q3TCX3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.56■□□□□ 0.24
Khdc4Q3TCX3 Fst-202ENSMUST00000223640 2612 ntBASIC16.56■□□□□ 0.24
Khdc4Q3TCX3 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.56■□□□□ 0.24
Khdc4Q3TCX3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.56■□□□□ 0.24
Khdc4Q3TCX3 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.56■□□□□ 0.24
Khdc4Q3TCX3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Khdc4Q3TCX3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Khdc4Q3TCX3 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Khdc4Q3TCX3 Gm21814-202ENSMUST00000203277 873 ntBASIC16.56■□□□□ 0.24
Khdc4Q3TCX3 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Khdc4Q3TCX3 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.56■□□□□ 0.24
Khdc4Q3TCX3 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Khdc4Q3TCX3 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.56■□□□□ 0.24
Khdc4Q3TCX3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Khdc4Q3TCX3 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Khdc4Q3TCX3 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Khdc4Q3TCX3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Khdc4Q3TCX3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Khdc4Q3TCX3 Tgds-204ENSMUST00000228543 1594 ntBASIC16.55■□□□□ 0.24
Khdc4Q3TCX3 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Khdc4Q3TCX3 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Khdc4Q3TCX3 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Khdc4Q3TCX3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Khdc4Q3TCX3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Khdc4Q3TCX3 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Khdc4Q3TCX3 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Khdc4Q3TCX3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Khdc4Q3TCX3 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Khdc4Q3TCX3 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Khdc4Q3TCX3 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.55■□□□□ 0.24
Khdc4Q3TCX3 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Khdc4Q3TCX3 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.55■□□□□ 0.24
Khdc4Q3TCX3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Khdc4Q3TCX3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Khdc4Q3TCX3 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Khdc4Q3TCX3 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Khdc4Q3TCX3 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Khdc4Q3TCX3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Khdc4Q3TCX3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.55■□□□□ 0.24
Khdc4Q3TCX3 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Khdc4Q3TCX3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Khdc4Q3TCX3 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.54■□□□□ 0.24
Khdc4Q3TCX3 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.54■□□□□ 0.24
Khdc4Q3TCX3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Khdc4Q3TCX3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Khdc4Q3TCX3 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms