Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Treml4Q3LRV9 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Treml4Q3LRV9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Treml4Q3LRV9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Treml4Q3LRV9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.32■□□□□ 0.2
Treml4Q3LRV9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Treml4Q3LRV9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Treml4Q3LRV9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Treml4Q3LRV9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Treml4Q3LRV9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.31■□□□□ 0.2
Treml4Q3LRV9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Treml4Q3LRV9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.31■□□□□ 0.2
Treml4Q3LRV9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Treml4Q3LRV9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Treml4Q3LRV9 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Treml4Q3LRV9 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Treml4Q3LRV9 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.31■□□□□ 0.2
Treml4Q3LRV9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.31■□□□□ 0.2
Treml4Q3LRV9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.31■□□□□ 0.2
Treml4Q3LRV9 Gm17661-201ENSMUST00000170317 270 ntBASIC16.31■□□□□ 0.2
Treml4Q3LRV9 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Treml4Q3LRV9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Treml4Q3LRV9 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.31■□□□□ 0.2
Treml4Q3LRV9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Treml4Q3LRV9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Treml4Q3LRV9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Treml4Q3LRV9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Treml4Q3LRV9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Treml4Q3LRV9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Treml4Q3LRV9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
Treml4Q3LRV9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Treml4Q3LRV9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Treml4Q3LRV9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Treml4Q3LRV9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Treml4Q3LRV9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Treml4Q3LRV9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Treml4Q3LRV9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Treml4Q3LRV9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Treml4Q3LRV9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Treml4Q3LRV9 Gm4974-201ENSMUST00000209974 875 ntBASIC16.3■□□□□ 0.2
Treml4Q3LRV9 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Treml4Q3LRV9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Treml4Q3LRV9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Treml4Q3LRV9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Treml4Q3LRV9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.3■□□□□ 0.2
Treml4Q3LRV9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Treml4Q3LRV9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.3■□□□□ 0.2
Treml4Q3LRV9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Treml4Q3LRV9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Treml4Q3LRV9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Treml4Q3LRV9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Treml4Q3LRV9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Treml4Q3LRV9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Treml4Q3LRV9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Treml4Q3LRV9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Treml4Q3LRV9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Treml4Q3LRV9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.29■□□□□ 0.2
Treml4Q3LRV9 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Treml4Q3LRV9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Treml4Q3LRV9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Treml4Q3LRV9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Treml4Q3LRV9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Treml4Q3LRV9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Treml4Q3LRV9 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.29■□□□□ 0.2
Treml4Q3LRV9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Treml4Q3LRV9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Treml4Q3LRV9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Treml4Q3LRV9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.28■□□□□ 0.2
Treml4Q3LRV9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Treml4Q3LRV9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Treml4Q3LRV9 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Treml4Q3LRV9 Gm7284-201ENSMUST00000131667 944 ntBASIC16.28■□□□□ 0.2
Treml4Q3LRV9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Treml4Q3LRV9 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Treml4Q3LRV9 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Treml4Q3LRV9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Treml4Q3LRV9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Treml4Q3LRV9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Treml4Q3LRV9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.28■□□□□ 0.2
Treml4Q3LRV9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Treml4Q3LRV9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Treml4Q3LRV9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Treml4Q3LRV9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Treml4Q3LRV9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Treml4Q3LRV9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Treml4Q3LRV9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Treml4Q3LRV9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Treml4Q3LRV9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Treml4Q3LRV9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Treml4Q3LRV9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Treml4Q3LRV9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Treml4Q3LRV9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Treml4Q3LRV9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Treml4Q3LRV9 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Treml4Q3LRV9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Treml4Q3LRV9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.27■□□□□ 0.2
Treml4Q3LRV9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Treml4Q3LRV9 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Treml4Q3LRV9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Treml4Q3LRV9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms