Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim72Q1XH17 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Trim72Q1XH17 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.59■□□□□ 0.57
Trim72Q1XH17 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Trim72Q1XH17 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.59■□□□□ 0.57
Trim72Q1XH17 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim72Q1XH17 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim72Q1XH17 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.59■□□□□ 0.57
Trim72Q1XH17 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim72Q1XH17 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim72Q1XH17 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim72Q1XH17 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Trim72Q1XH17 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim72Q1XH17 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.58■□□□□ 0.57
Trim72Q1XH17 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trim72Q1XH17 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trim72Q1XH17 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Trim72Q1XH17 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.58■□□□□ 0.57
Trim72Q1XH17 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim72Q1XH17 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trim72Q1XH17 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim72Q1XH17 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.58■□□□□ 0.56
Trim72Q1XH17 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim72Q1XH17 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim72Q1XH17 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Trim72Q1XH17 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim72Q1XH17 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trim72Q1XH17 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim72Q1XH17 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim72Q1XH17 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim72Q1XH17 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Trim72Q1XH17 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.57■□□□□ 0.56
Trim72Q1XH17 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim72Q1XH17 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.57■□□□□ 0.56
Trim72Q1XH17 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Trim72Q1XH17 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.57■□□□□ 0.56
Trim72Q1XH17 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.57■□□□□ 0.56
Trim72Q1XH17 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trim72Q1XH17 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim72Q1XH17 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim72Q1XH17 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim72Q1XH17 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.57■□□□□ 0.56
Trim72Q1XH17 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim72Q1XH17 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim72Q1XH17 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim72Q1XH17 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim72Q1XH17 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim72Q1XH17 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim72Q1XH17 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim72Q1XH17 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Trim72Q1XH17 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim72Q1XH17 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim72Q1XH17 Gm27011-201ENSMUST00000182352 972 ntBASIC18.56■□□□□ 0.56
Trim72Q1XH17 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.56■□□□□ 0.56
Trim72Q1XH17 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim72Q1XH17 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim72Q1XH17 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.56■□□□□ 0.56
Trim72Q1XH17 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim72Q1XH17 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.56■□□□□ 0.56
Trim72Q1XH17 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim72Q1XH17 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trim72Q1XH17 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim72Q1XH17 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.55■□□□□ 0.56
Trim72Q1XH17 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Trim72Q1XH17 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim72Q1XH17 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.55■□□□□ 0.56
Trim72Q1XH17 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim72Q1XH17 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Trim72Q1XH17 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim72Q1XH17 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim72Q1XH17 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Trim72Q1XH17 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim72Q1XH17 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Trim72Q1XH17 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim72Q1XH17 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.54■□□□□ 0.56
Trim72Q1XH17 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim72Q1XH17 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim72Q1XH17 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Trim72Q1XH17 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim72Q1XH17 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim72Q1XH17 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.54■□□□□ 0.56
Trim72Q1XH17 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim72Q1XH17 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim72Q1XH17 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim72Q1XH17 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Trim72Q1XH17 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim72Q1XH17 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim72Q1XH17 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim72Q1XH17 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim72Q1XH17 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trim72Q1XH17 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim72Q1XH17 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Trim72Q1XH17 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.53■□□□□ 0.56
Trim72Q1XH17 Gm22240-201ENSMUST00000175225 82 ntBASIC18.53■□□□□ 0.56
Trim72Q1XH17 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim72Q1XH17 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim72Q1XH17 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim72Q1XH17 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Trim72Q1XH17 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim72Q1XH17 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms