Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx4Q07424 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx4Q07424 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx4Q07424 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Cdx4Q07424 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx4Q07424 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx4Q07424 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx4Q07424 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx4Q07424 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx4Q07424 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx4Q07424 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.47□□□□□ -0.25
Cdx4Q07424 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Cdx4Q07424 Gm5828-201ENSMUST00000071842 1860 ntBASIC13.47□□□□□ -0.25
Cdx4Q07424 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx4Q07424 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx4Q07424 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx4Q07424 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx4Q07424 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx4Q07424 Gm5643-201ENSMUST00000117081 966 ntBASIC13.47□□□□□ -0.25
Cdx4Q07424 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx4Q07424 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx4Q07424 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC13.47□□□□□ -0.25
Cdx4Q07424 Gm10252-201ENSMUST00000209541 832 ntBASIC13.47□□□□□ -0.25
Cdx4Q07424 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.47□□□□□ -0.25
Cdx4Q07424 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx4Q07424 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx4Q07424 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx4Q07424 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx4Q07424 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx4Q07424 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx4Q07424 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx4Q07424 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx4Q07424 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx4Q07424 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx4Q07424 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC13.47□□□□□ -0.25
Cdx4Q07424 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx4Q07424 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdx4Q07424 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdx4Q07424 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdx4Q07424 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdx4Q07424 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdx4Q07424 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdx4Q07424 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdx4Q07424 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cdx4Q07424 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdx4Q07424 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Cdx4Q07424 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdx4Q07424 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
Cdx4Q07424 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdx4Q07424 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdx4Q07424 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdx4Q07424 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Cdx4Q07424 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Cdx4Q07424 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdx4Q07424 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdx4Q07424 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdx4Q07424 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.46□□□□□ -0.25
Cdx4Q07424 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdx4Q07424 Gm13158-201ENSMUST00000122007 736 ntBASIC13.46□□□□□ -0.25
Cdx4Q07424 Gm6576-201ENSMUST00000169678 883 ntBASIC13.46□□□□□ -0.25
Cdx4Q07424 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdx4Q07424 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdx4Q07424 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.46□□□□□ -0.25
Cdx4Q07424 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Cdx4Q07424 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdx4Q07424 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdx4Q07424 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
Cdx4Q07424 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cdx4Q07424 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC13.46□□□□□ -0.26
Cdx4Q07424 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdx4Q07424 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx4Q07424 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx4Q07424 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC13.45□□□□□ -0.26
Cdx4Q07424 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx4Q07424 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx4Q07424 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx4Q07424 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx4Q07424 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx4Q07424 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC13.45□□□□□ -0.26
Cdx4Q07424 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Cdx4Q07424 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx4Q07424 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx4Q07424 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx4Q07424 Gm11249-201ENSMUST00000117071 859 ntBASIC13.45□□□□□ -0.26
Cdx4Q07424 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.45□□□□□ -0.26
Cdx4Q07424 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC13.45□□□□□ -0.26
Cdx4Q07424 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Cdx4Q07424 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx4Q07424 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx4Q07424 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx4Q07424 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx4Q07424 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.45□□□□□ -0.26
Cdx4Q07424 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx4Q07424 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx4Q07424 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx4Q07424 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx4Q07424 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdx4Q07424 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdx4Q07424 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cdx4Q07424 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms