Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col10a1Q05306 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col10a1Q05306 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col10a1Q05306 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.06■□□□□ 0.16
Col10a1Q05306 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col10a1Q05306 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.06■□□□□ 0.16
Col10a1Q05306 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col10a1Q05306 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col10a1Q05306 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.06■□□□□ 0.16
Col10a1Q05306 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.06■□□□□ 0.16
Col10a1Q05306 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.06■□□□□ 0.16
Col10a1Q05306 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col10a1Q05306 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col10a1Q05306 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col10a1Q05306 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col10a1Q05306 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Col10a1Q05306 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col10a1Q05306 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col10a1Q05306 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col10a1Q05306 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Col10a1Q05306 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.05■□□□□ 0.16
Col10a1Q05306 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col10a1Q05306 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col10a1Q05306 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col10a1Q05306 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.05■□□□□ 0.16
Col10a1Q05306 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.05■□□□□ 0.16
Col10a1Q05306 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col10a1Q05306 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.05■□□□□ 0.16
Col10a1Q05306 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col10a1Q05306 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.05■□□□□ 0.16
Col10a1Q05306 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col10a1Q05306 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col10a1Q05306 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col10a1Q05306 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.05■□□□□ 0.16
Col10a1Q05306 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col10a1Q05306 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col10a1Q05306 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col10a1Q05306 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.05■□□□□ 0.16
Col10a1Q05306 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col10a1Q05306 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col10a1Q05306 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Col10a1Q05306 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col10a1Q05306 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col10a1Q05306 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col10a1Q05306 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Col10a1Q05306 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col10a1Q05306 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col10a1Q05306 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col10a1Q05306 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col10a1Q05306 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col10a1Q05306 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col10a1Q05306 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col10a1Q05306 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.04■□□□□ 0.16
Col10a1Q05306 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col10a1Q05306 Gm4974-201ENSMUST00000209974 875 ntBASIC16.04■□□□□ 0.16
Col10a1Q05306 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col10a1Q05306 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.04■□□□□ 0.16
Col10a1Q05306 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col10a1Q05306 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Col10a1Q05306 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Col10a1Q05306 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col10a1Q05306 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Col10a1Q05306 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.04■□□□□ 0.16
Col10a1Q05306 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col10a1Q05306 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.03■□□□□ 0.16
Col10a1Q05306 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.03■□□□□ 0.16
Col10a1Q05306 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col10a1Q05306 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.03■□□□□ 0.16
Col10a1Q05306 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col10a1Q05306 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col10a1Q05306 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col10a1Q05306 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col10a1Q05306 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col10a1Q05306 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col10a1Q05306 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col10a1Q05306 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col10a1Q05306 Mir8112-201ENSMUST00000184382 131 ntBASIC16.03■□□□□ 0.16
Col10a1Q05306 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Col10a1Q05306 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col10a1Q05306 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Col10a1Q05306 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col10a1Q05306 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Col10a1Q05306 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col10a1Q05306 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col10a1Q05306 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col10a1Q05306 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col10a1Q05306 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.02■□□□□ 0.16
Col10a1Q05306 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col10a1Q05306 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col10a1Q05306 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col10a1Q05306 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col10a1Q05306 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col10a1Q05306 Gm715-201ENSMUST00000117865 831 ntBASIC16.02■□□□□ 0.16
Col10a1Q05306 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col10a1Q05306 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col10a1Q05306 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.02■□□□□ 0.16
Col10a1Q05306 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.02■□□□□ 0.16
Col10a1Q05306 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col10a1Q05306 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Col10a1Q05306 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms