Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
GabpaQ00422 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GabpaQ00422 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GabpaQ00422 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
GabpaQ00422 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
GabpaQ00422 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
GabpaQ00422 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
GabpaQ00422 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
GabpaQ00422 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.83■□□□□ 0.76
GabpaQ00422 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
GabpaQ00422 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
GabpaQ00422 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GabpaQ00422 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.83■□□□□ 0.76
GabpaQ00422 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GabpaQ00422 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GabpaQ00422 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.83■□□□□ 0.76
GabpaQ00422 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
GabpaQ00422 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GabpaQ00422 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GabpaQ00422 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GabpaQ00422 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
GabpaQ00422 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.82■□□□□ 0.76
GabpaQ00422 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
GabpaQ00422 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GabpaQ00422 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GabpaQ00422 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.82■□□□□ 0.76
GabpaQ00422 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GabpaQ00422 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GabpaQ00422 Gm10819-201ENSMUST00000099988 561 ntBASIC19.82■□□□□ 0.76
GabpaQ00422 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GabpaQ00422 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GabpaQ00422 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
GabpaQ00422 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
GabpaQ00422 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GabpaQ00422 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GabpaQ00422 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GabpaQ00422 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GabpaQ00422 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GabpaQ00422 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.81■□□□□ 0.76
GabpaQ00422 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
GabpaQ00422 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GabpaQ00422 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.81■□□□□ 0.76
GabpaQ00422 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GabpaQ00422 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GabpaQ00422 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.81■□□□□ 0.76
GabpaQ00422 Mir1668-201ENSMUST00000184114 107 ntBASIC19.81■□□□□ 0.76
GabpaQ00422 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GabpaQ00422 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GabpaQ00422 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.81■□□□□ 0.76
GabpaQ00422 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GabpaQ00422 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
GabpaQ00422 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GabpaQ00422 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GabpaQ00422 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GabpaQ00422 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
GabpaQ00422 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.8■□□□□ 0.76
GabpaQ00422 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
GabpaQ00422 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GabpaQ00422 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
GabpaQ00422 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.8■□□□□ 0.76
GabpaQ00422 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
GabpaQ00422 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.8■□□□□ 0.76
GabpaQ00422 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.8■□□□□ 0.76
GabpaQ00422 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.8■□□□□ 0.76
GabpaQ00422 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GabpaQ00422 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GabpaQ00422 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GabpaQ00422 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.8■□□□□ 0.76
GabpaQ00422 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
GabpaQ00422 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
GabpaQ00422 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GabpaQ00422 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GabpaQ00422 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GabpaQ00422 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
GabpaQ00422 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GabpaQ00422 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.79■□□□□ 0.76
GabpaQ00422 Gm21559-201ENSMUST00000220638 855 ntBASIC19.79■□□□□ 0.76
GabpaQ00422 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GabpaQ00422 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
GabpaQ00422 Gm7367-201ENSMUST00000057611 492 ntBASIC19.79■□□□□ 0.76
GabpaQ00422 Gm8587-201ENSMUST00000076538 843 ntBASIC19.79■□□□□ 0.76
GabpaQ00422 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GabpaQ00422 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
GabpaQ00422 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GabpaQ00422 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
GabpaQ00422 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GabpaQ00422 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
GabpaQ00422 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
GabpaQ00422 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GabpaQ00422 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GabpaQ00422 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.78■□□□□ 0.76
GabpaQ00422 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
GabpaQ00422 Gm33142-201ENSMUST00000193913 867 ntBASIC19.78■□□□□ 0.76
GabpaQ00422 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
GabpaQ00422 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GabpaQ00422 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GabpaQ00422 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GabpaQ00422 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GabpaQ00422 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
GabpaQ00422 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms