Protein–RNA interactions for Protein: P97785

Gfra1, GDNF family receptor alpha-1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra1P97785 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gfra1P97785 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gfra1P97785 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Gfra1P97785 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gfra1P97785 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Gfra1P97785 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gfra1P97785 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gfra1P97785 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gfra1P97785 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.4□□□□□ -0.1
Gfra1P97785 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gfra1P97785 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gfra1P97785 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.4□□□□□ -0.1
Gfra1P97785 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gfra1P97785 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gfra1P97785 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gfra1P97785 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gfra1P97785 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.4□□□□□ -0.1
Gfra1P97785 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Gfra1P97785 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gfra1P97785 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gfra1P97785 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.4□□□□□ -0.1
Gfra1P97785 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gfra1P97785 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gfra1P97785 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gfra1P97785 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gfra1P97785 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gfra1P97785 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gfra1P97785 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gfra1P97785 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Gfra1P97785 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gfra1P97785 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.39□□□□□ -0.11
Gfra1P97785 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.39□□□□□ -0.11
Gfra1P97785 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gfra1P97785 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gfra1P97785 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Gfra1P97785 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gfra1P97785 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gfra1P97785 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Gfra1P97785 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Gfra1P97785 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gfra1P97785 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gfra1P97785 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Gfra1P97785 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra1P97785 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra1P97785 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra1P97785 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra1P97785 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra1P97785 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra1P97785 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Gfra1P97785 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.38□□□□□ -0.11
Gfra1P97785 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.38□□□□□ -0.11
Gfra1P97785 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Gfra1P97785 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.38□□□□□ -0.11
Gfra1P97785 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra1P97785 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra1P97785 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra1P97785 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra1P97785 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra1P97785 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.38□□□□□ -0.11
Gfra1P97785 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra1P97785 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra1P97785 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.38□□□□□ -0.11
Gfra1P97785 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.37□□□□□ -0.11
Gfra1P97785 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gfra1P97785 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Gfra1P97785 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gfra1P97785 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gfra1P97785 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gfra1P97785 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.37□□□□□ -0.11
Gfra1P97785 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Gfra1P97785 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Gfra1P97785 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gfra1P97785 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gfra1P97785 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Gfra1P97785 Gm6433-201ENSMUST00000118634 875 ntBASIC14.37□□□□□ -0.11
Gfra1P97785 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.37□□□□□ -0.11
Gfra1P97785 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.37□□□□□ -0.11
Gfra1P97785 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gfra1P97785 Gm27463-201ENSMUST00000183569 57 ntBASIC14.37□□□□□ -0.11
Gfra1P97785 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gfra1P97785 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.37□□□□□ -0.11
Gfra1P97785 Gm43799-201ENSMUST00000201845 579 ntBASIC14.37□□□□□ -0.11
Gfra1P97785 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Gfra1P97785 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Gfra1P97785 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gfra1P97785 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gfra1P97785 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gfra1P97785 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gfra1P97785 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gfra1P97785 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gfra1P97785 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Gfra1P97785 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gfra1P97785 Grk6-206ENSMUST00000224995 2971 ntBASIC14.36□□□□□ -0.11
Gfra1P97785 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.36□□□□□ -0.11
Gfra1P97785 Gm12085-201ENSMUST00000119263 940 ntBASIC14.36□□□□□ -0.11
Gfra1P97785 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gfra1P97785 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gfra1P97785 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Gfra1P97785 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gfra1P97785 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms