Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx3-2P97503 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx3-2P97503 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx3-2P97503 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx3-2P97503 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx3-2P97503 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx3-2P97503 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx3-2P97503 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx3-2P97503 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Nkx3-2P97503 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.45■□□□□ 0.22
Nkx3-2P97503 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Nkx3-2P97503 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx3-2P97503 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Nkx3-2P97503 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx3-2P97503 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx3-2P97503 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx3-2P97503 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nkx3-2P97503 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nkx3-2P97503 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nkx3-2P97503 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nkx3-2P97503 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.44■□□□□ 0.22
Nkx3-2P97503 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nkx3-2P97503 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Nkx3-2P97503 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Nkx3-2P97503 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Nkx3-2P97503 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nkx3-2P97503 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Nkx3-2P97503 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Nkx3-2P97503 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Nkx3-2P97503 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.44■□□□□ 0.22
Nkx3-2P97503 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.44■□□□□ 0.22
Nkx3-2P97503 Gm30025-201ENSMUST00000218555 728 ntBASIC16.44■□□□□ 0.22
Nkx3-2P97503 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Nkx3-2P97503 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nkx3-2P97503 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nkx3-2P97503 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Nkx3-2P97503 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nkx3-2P97503 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx3-2P97503 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx3-2P97503 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Nkx3-2P97503 Tgds-204ENSMUST00000228543 1594 ntBASIC16.43■□□□□ 0.22
Nkx3-2P97503 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx3-2P97503 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx3-2P97503 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx3-2P97503 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx3-2P97503 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx3-2P97503 Gm43799-201ENSMUST00000201845 579 ntBASIC16.43■□□□□ 0.22
Nkx3-2P97503 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.43■□□□□ 0.22
Nkx3-2P97503 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.43■□□□□ 0.22
Nkx3-2P97503 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx3-2P97503 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx3-2P97503 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.43■□□□□ 0.22
Nkx3-2P97503 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Nkx3-2P97503 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx3-2P97503 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx3-2P97503 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.43■□□□□ 0.22
Nkx3-2P97503 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx3-2P97503 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx3-2P97503 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx3-2P97503 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx3-2P97503 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx3-2P97503 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx3-2P97503 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx3-2P97503 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx3-2P97503 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx3-2P97503 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx3-2P97503 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx3-2P97503 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx3-2P97503 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx3-2P97503 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx3-2P97503 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.42■□□□□ 0.22
Nkx3-2P97503 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx3-2P97503 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx3-2P97503 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx3-2P97503 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx3-2P97503 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx3-2P97503 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx3-2P97503 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.41■□□□□ 0.22
Nkx3-2P97503 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Nkx3-2P97503 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx3-2P97503 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx3-2P97503 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.41■□□□□ 0.22
Nkx3-2P97503 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx3-2P97503 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx3-2P97503 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.41■□□□□ 0.22
Nkx3-2P97503 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.41■□□□□ 0.22
Nkx3-2P97503 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx3-2P97503 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Nkx3-2P97503 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.41■□□□□ 0.22
Nkx3-2P97503 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx3-2P97503 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Nkx3-2P97503 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx3-2P97503 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx3-2P97503 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx3-2P97503 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx3-2P97503 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx3-2P97503 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx3-2P97503 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx3-2P97503 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.4■□□□□ 0.22
Nkx3-2P97503 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms