Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1aP97445 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1aP97445 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Cacna1aP97445 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Cacna1aP97445 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1aP97445 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1aP97445 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Cacna1aP97445 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.03■□□□□ 0.16
Cacna1aP97445 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1aP97445 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Cacna1aP97445 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.03■□□□□ 0.16
Cacna1aP97445 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.03■□□□□ 0.16
Cacna1aP97445 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1aP97445 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1aP97445 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1aP97445 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Cacna1aP97445 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1aP97445 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna1aP97445 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.02■□□□□ 0.16
Cacna1aP97445 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna1aP97445 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna1aP97445 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna1aP97445 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna1aP97445 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna1aP97445 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna1aP97445 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna1aP97445 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna1aP97445 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.02■□□□□ 0.16
Cacna1aP97445 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna1aP97445 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna1aP97445 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna1aP97445 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.02■□□□□ 0.15
Cacna1aP97445 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.02■□□□□ 0.15
Cacna1aP97445 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cacna1aP97445 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.02■□□□□ 0.15
Cacna1aP97445 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cacna1aP97445 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
Cacna1aP97445 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cacna1aP97445 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cacna1aP97445 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cacna1aP97445 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1aP97445 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Cacna1aP97445 Actl10-202ENSMUST00000226583 1501 ntBASIC16.01■□□□□ 0.15
Cacna1aP97445 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Cacna1aP97445 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1aP97445 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Cacna1aP97445 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1aP97445 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1aP97445 Gm37025-201ENSMUST00000195159 829 ntBASIC16.01■□□□□ 0.15
Cacna1aP97445 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.01■□□□□ 0.15
Cacna1aP97445 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1aP97445 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1aP97445 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1aP97445 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1aP97445 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.01■□□□□ 0.15
Cacna1aP97445 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1aP97445 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.01■□□□□ 0.15
Cacna1aP97445 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.01■□□□□ 0.15
Cacna1aP97445 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Cacna1aP97445 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1aP97445 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1aP97445 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1aP97445 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1aP97445 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1aP97445 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1aP97445 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1aP97445 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cacna1aP97445 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16■□□□□ 0.15
Cacna1aP97445 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cacna1aP97445 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Cacna1aP97445 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16■□□□□ 0.15
Cacna1aP97445 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cacna1aP97445 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1aP97445 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1aP97445 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Cacna1aP97445 Gm27459-201ENSMUST00000184860 107 ntBASIC16■□□□□ 0.15
Cacna1aP97445 AC159093.1-201ENSMUST00000227779 380 ntBASIC16■□□□□ 0.15
Cacna1aP97445 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1aP97445 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1aP97445 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16■□□□□ 0.15
Cacna1aP97445 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cacna1aP97445 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16■□□□□ 0.15
Cacna1aP97445 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cacna1aP97445 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cacna1aP97445 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cacna1aP97445 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cacna1aP97445 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cacna1aP97445 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cacna1aP97445 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cacna1aP97445 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cacna1aP97445 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cacna1aP97445 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cacna1aP97445 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
Cacna1aP97445 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
Cacna1aP97445 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cacna1aP97445 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cacna1aP97445 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cacna1aP97445 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cacna1aP97445 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cacna1aP97445 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms