Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh6P97326 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh6P97326 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Cdh6P97326 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh6P97326 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh6P97326 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh6P97326 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh6P97326 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh6P97326 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh6P97326 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.66■□□□□ 0.42
Cdh6P97326 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.66■□□□□ 0.42
Cdh6P97326 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.66■□□□□ 0.42
Cdh6P97326 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh6P97326 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Cdh6P97326 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh6P97326 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh6P97326 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh6P97326 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh6P97326 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.66■□□□□ 0.42
Cdh6P97326 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh6P97326 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.66■□□□□ 0.42
Cdh6P97326 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Cdh6P97326 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh6P97326 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh6P97326 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.65■□□□□ 0.42
Cdh6P97326 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.65■□□□□ 0.42
Cdh6P97326 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh6P97326 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh6P97326 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Cdh6P97326 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh6P97326 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh6P97326 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.65■□□□□ 0.42
Cdh6P97326 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Cdh6P97326 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh6P97326 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh6P97326 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh6P97326 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh6P97326 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh6P97326 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh6P97326 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Cdh6P97326 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cdh6P97326 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh6P97326 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh6P97326 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.64■□□□□ 0.41
Cdh6P97326 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh6P97326 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh6P97326 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.64■□□□□ 0.41
Cdh6P97326 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Cdh6P97326 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh6P97326 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.64■□□□□ 0.41
Cdh6P97326 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh6P97326 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh6P97326 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Cdh6P97326 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh6P97326 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh6P97326 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh6P97326 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh6P97326 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh6P97326 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh6P97326 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh6P97326 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cdh6P97326 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh6P97326 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh6P97326 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cdh6P97326 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh6P97326 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh6P97326 Gm715-201ENSMUST00000117865 831 ntBASIC17.63■□□□□ 0.41
Cdh6P97326 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh6P97326 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.63■□□□□ 0.41
Cdh6P97326 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.63■□□□□ 0.41
Cdh6P97326 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.63■□□□□ 0.41
Cdh6P97326 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh6P97326 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cdh6P97326 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.63■□□□□ 0.41
Cdh6P97326 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh6P97326 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh6P97326 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh6P97326 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cdh6P97326 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh6P97326 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh6P97326 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh6P97326 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh6P97326 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh6P97326 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh6P97326 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.62■□□□□ 0.41
Cdh6P97326 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh6P97326 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Cdh6P97326 Gm24841-201ENSMUST00000158676 357 ntBASIC17.62■□□□□ 0.41
Cdh6P97326 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.62■□□□□ 0.41
Cdh6P97326 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.62■□□□□ 0.41
Cdh6P97326 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh6P97326 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Cdh6P97326 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh6P97326 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh6P97326 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh6P97326 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cdh6P97326 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh6P97326 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.61■□□□□ 0.41
Cdh6P97326 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh6P97326 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms