Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim43cP86449 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim43cP86449 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim43cP86449 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim43cP86449 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Trim43cP86449 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.93■□□□□ 0.62
Trim43cP86449 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim43cP86449 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim43cP86449 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim43cP86449 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim43cP86449 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim43cP86449 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim43cP86449 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim43cP86449 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim43cP86449 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Trim43cP86449 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Trim43cP86449 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim43cP86449 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.92■□□□□ 0.62
Trim43cP86449 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim43cP86449 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.92■□□□□ 0.62
Trim43cP86449 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.92■□□□□ 0.62
Trim43cP86449 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim43cP86449 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Trim43cP86449 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim43cP86449 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.92■□□□□ 0.62
Trim43cP86449 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim43cP86449 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.92■□□□□ 0.62
Trim43cP86449 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim43cP86449 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Trim43cP86449 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim43cP86449 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Trim43cP86449 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43cP86449 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Trim43cP86449 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43cP86449 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
Trim43cP86449 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Trim43cP86449 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43cP86449 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Trim43cP86449 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43cP86449 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43cP86449 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43cP86449 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.91■□□□□ 0.62
Trim43cP86449 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43cP86449 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.91■□□□□ 0.62
Trim43cP86449 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Trim43cP86449 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.91■□□□□ 0.62
Trim43cP86449 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43cP86449 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43cP86449 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43cP86449 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43cP86449 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43cP86449 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43cP86449 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43cP86449 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Trim43cP86449 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43cP86449 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43cP86449 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43cP86449 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Trim43cP86449 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim43cP86449 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim43cP86449 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim43cP86449 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Trim43cP86449 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim43cP86449 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim43cP86449 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim43cP86449 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim43cP86449 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.9■□□□□ 0.62
Trim43cP86449 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.9■□□□□ 0.62
Trim43cP86449 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.9■□□□□ 0.62
Trim43cP86449 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim43cP86449 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.9■□□□□ 0.62
Trim43cP86449 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim43cP86449 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim43cP86449 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim43cP86449 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim43cP86449 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim43cP86449 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Trim43cP86449 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim43cP86449 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Trim43cP86449 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim43cP86449 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.9■□□□□ 0.62
Trim43cP86449 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trim43cP86449 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim43cP86449 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim43cP86449 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim43cP86449 Gm715-201ENSMUST00000117865 831 ntBASIC18.89■□□□□ 0.61
Trim43cP86449 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim43cP86449 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim43cP86449 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.89■□□□□ 0.61
Trim43cP86449 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.89■□□□□ 0.61
Trim43cP86449 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Trim43cP86449 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim43cP86449 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim43cP86449 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim43cP86449 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim43cP86449 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim43cP86449 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim43cP86449 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim43cP86449 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim43cP86449 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms