Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ldb1P70662 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.37■□□□□ 0.37
Ldb1P70662 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ldb1P70662 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ldb1P70662 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.36■□□□□ 0.37
Ldb1P70662 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ldb1P70662 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ldb1P70662 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ldb1P70662 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ldb1P70662 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ldb1P70662 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ldb1P70662 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ldb1P70662 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ldb1P70662 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ldb1P70662 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ldb1P70662 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.36■□□□□ 0.37
Ldb1P70662 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ldb1P70662 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ldb1P70662 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ldb1P70662 Gm6576-201ENSMUST00000169678 883 ntBASIC17.36■□□□□ 0.37
Ldb1P70662 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ldb1P70662 Mir8112-201ENSMUST00000184382 131 ntBASIC17.36■□□□□ 0.37
Ldb1P70662 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.36■□□□□ 0.37
Ldb1P70662 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.36■□□□□ 0.37
Ldb1P70662 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ldb1P70662 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ldb1P70662 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ldb1P70662 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ldb1P70662 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ldb1P70662 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ldb1P70662 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ldb1P70662 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ldb1P70662 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ldb1P70662 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.36■□□□□ 0.37
Ldb1P70662 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Ldb1P70662 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ldb1P70662 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ldb1P70662 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ldb1P70662 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ldb1P70662 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Ldb1P70662 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ldb1P70662 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ldb1P70662 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ldb1P70662 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ldb1P70662 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ldb1P70662 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ldb1P70662 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ldb1P70662 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.35■□□□□ 0.37
Ldb1P70662 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ldb1P70662 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.35■□□□□ 0.37
Ldb1P70662 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Ldb1P70662 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.35■□□□□ 0.37
Ldb1P70662 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ldb1P70662 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ldb1P70662 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ldb1P70662 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ldb1P70662 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ldb1P70662 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ldb1P70662 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ldb1P70662 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ldb1P70662 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ldb1P70662 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.34■□□□□ 0.37
Ldb1P70662 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ldb1P70662 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.34■□□□□ 0.37
Ldb1P70662 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.34■□□□□ 0.37
Ldb1P70662 Gm18666-201ENSMUST00000190039 958 ntBASIC17.34■□□□□ 0.37
Ldb1P70662 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.34■□□□□ 0.37
Ldb1P70662 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.34■□□□□ 0.37
Ldb1P70662 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Ldb1P70662 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ldb1P70662 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ldb1P70662 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ldb1P70662 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ldb1P70662 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ldb1P70662 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ldb1P70662 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ldb1P70662 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ldb1P70662 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ldb1P70662 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ldb1P70662 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ldb1P70662 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ldb1P70662 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ldb1P70662 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ldb1P70662 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Ldb1P70662 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Ldb1P70662 Gm5643-201ENSMUST00000117081 966 ntBASIC17.33■□□□□ 0.36
Ldb1P70662 Gm11643-201ENSMUST00000119578 864 ntBASIC17.33■□□□□ 0.36
Ldb1P70662 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ldb1P70662 Gm37292-201ENSMUST00000192062 758 ntBASIC17.33■□□□□ 0.36
Ldb1P70662 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.33■□□□□ 0.36
Ldb1P70662 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ldb1P70662 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Ldb1P70662 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Ldb1P70662 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ldb1P70662 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
Ldb1P70662 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Ldb1P70662 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Ldb1P70662 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ldb1P70662 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ldb1P70662 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms