Protein–RNA interactions for Protein: P70441

Slc9a3r1, Na(+)/H(+) exchange regulatory cofactor NHE-RF1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a3r1P70441 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Slc9a3r1P70441 Gm27463-201ENSMUST00000183569 57 ntBASIC16.67■□□□□ 0.26
Slc9a3r1P70441 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Slc9a3r1P70441 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc9a3r1P70441 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc9a3r1P70441 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc9a3r1P70441 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc9a3r1P70441 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc9a3r1P70441 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc9a3r1P70441 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc9a3r1P70441 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc9a3r1P70441 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc9a3r1P70441 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc9a3r1P70441 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc9a3r1P70441 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc9a3r1P70441 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc9a3r1P70441 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc9a3r1P70441 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc9a3r1P70441 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc9a3r1P70441 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc9a3r1P70441 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc9a3r1P70441 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc9a3r1P70441 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.66■□□□□ 0.26
Slc9a3r1P70441 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Slc9a3r1P70441 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Slc9a3r1P70441 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.66■□□□□ 0.26
Slc9a3r1P70441 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc9a3r1P70441 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc9a3r1P70441 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc9a3r1P70441 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc9a3r1P70441 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Slc9a3r1P70441 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Slc9a3r1P70441 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc9a3r1P70441 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc9a3r1P70441 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Slc9a3r1P70441 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.66■□□□□ 0.26
Slc9a3r1P70441 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc9a3r1P70441 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.66■□□□□ 0.26
Slc9a3r1P70441 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc9a3r1P70441 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc9a3r1P70441 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Slc9a3r1P70441 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc9a3r1P70441 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc9a3r1P70441 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Slc9a3r1P70441 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Slc9a3r1P70441 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc9a3r1P70441 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc9a3r1P70441 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc9a3r1P70441 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc9a3r1P70441 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc9a3r1P70441 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc9a3r1P70441 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.65■□□□□ 0.26
Slc9a3r1P70441 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.65■□□□□ 0.26
Slc9a3r1P70441 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc9a3r1P70441 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Slc9a3r1P70441 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc9a3r1P70441 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc9a3r1P70441 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc9a3r1P70441 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.65■□□□□ 0.26
Slc9a3r1P70441 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc9a3r1P70441 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc9a3r1P70441 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc9a3r1P70441 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc9a3r1P70441 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.26
Slc9a3r1P70441 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Slc9a3r1P70441 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Slc9a3r1P70441 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Slc9a3r1P70441 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc9a3r1P70441 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc9a3r1P70441 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Slc9a3r1P70441 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Slc9a3r1P70441 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.64■□□□□ 0.25
Slc9a3r1P70441 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.64■□□□□ 0.25
Slc9a3r1P70441 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc9a3r1P70441 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.64■□□□□ 0.25
Slc9a3r1P70441 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Slc9a3r1P70441 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc9a3r1P70441 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Slc9a3r1P70441 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc9a3r1P70441 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc9a3r1P70441 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Slc9a3r1P70441 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc9a3r1P70441 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Slc9a3r1P70441 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc9a3r1P70441 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc9a3r1P70441 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.63■□□□□ 0.25
Slc9a3r1P70441 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Slc9a3r1P70441 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Slc9a3r1P70441 Gm18959-201ENSMUST00000208954 655 ntBASIC16.63■□□□□ 0.25
Slc9a3r1P70441 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.63■□□□□ 0.25
Slc9a3r1P70441 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Slc9a3r1P70441 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc9a3r1P70441 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc9a3r1P70441 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Slc9a3r1P70441 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc9a3r1P70441 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Slc9a3r1P70441 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc9a3r1P70441 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Slc9a3r1P70441 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc9a3r1P70441 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms