Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp46P62069 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp46P62069 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Usp46P62069 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp46P62069 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp46P62069 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp46P62069 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC18.22■□□□□ 0.51
Usp46P62069 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Usp46P62069 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
Usp46P62069 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp46P62069 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp46P62069 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp46P62069 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp46P62069 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp46P62069 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Usp46P62069 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Usp46P62069 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp46P62069 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Usp46P62069 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp46P62069 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp46P62069 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp46P62069 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp46P62069 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Usp46P62069 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp46P62069 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp46P62069 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Usp46P62069 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Usp46P62069 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp46P62069 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.21■□□□□ 0.51
Usp46P62069 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp46P62069 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Usp46P62069 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp46P62069 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp46P62069 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Usp46P62069 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Usp46P62069 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Usp46P62069 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp46P62069 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Usp46P62069 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.2■□□□□ 0.5
Usp46P62069 Gm24841-201ENSMUST00000158676 357 ntBASIC18.2■□□□□ 0.5
Usp46P62069 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.2■□□□□ 0.5
Usp46P62069 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.2■□□□□ 0.5
Usp46P62069 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Usp46P62069 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp46P62069 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Usp46P62069 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp46P62069 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.2■□□□□ 0.5
Usp46P62069 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp46P62069 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
Usp46P62069 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp46P62069 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp46P62069 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.19■□□□□ 0.5
Usp46P62069 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp46P62069 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp46P62069 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp46P62069 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp46P62069 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Usp46P62069 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp46P62069 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp46P62069 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp46P62069 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Usp46P62069 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Usp46P62069 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp46P62069 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Usp46P62069 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp46P62069 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp46P62069 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Usp46P62069 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Usp46P62069 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp46P62069 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.18■□□□□ 0.5
Usp46P62069 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp46P62069 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp46P62069 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp46P62069 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Usp46P62069 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp46P62069 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.18■□□□□ 0.5
Usp46P62069 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp46P62069 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.18■□□□□ 0.5
Usp46P62069 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
Usp46P62069 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Usp46P62069 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.17■□□□□ 0.5
Usp46P62069 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp46P62069 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp46P62069 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp46P62069 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp46P62069 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Usp46P62069 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.17■□□□□ 0.5
Usp46P62069 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Usp46P62069 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.17■□□□□ 0.5
Usp46P62069 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Usp46P62069 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Usp46P62069 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Usp46P62069 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp46P62069 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp46P62069 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Usp46P62069 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
Usp46P62069 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Usp46P62069 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp46P62069 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp46P62069 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms