Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Gm18206-201ENSMUST00000207027 926 ntBASIC20.52■□□□□ 0.88
Lrch1P62046 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Lrch1P62046 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lrch1P62046 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.52■□□□□ 0.87
Lrch1P62046 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Lrch1P62046 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Lrch1P62046 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lrch1P62046 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lrch1P62046 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lrch1P62046 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
Lrch1P62046 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lrch1P62046 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC20.51■□□□□ 0.87
Lrch1P62046 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC20.51■□□□□ 0.87
Lrch1P62046 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
Lrch1P62046 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lrch1P62046 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC20.51■□□□□ 0.87
Lrch1P62046 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lrch1P62046 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lrch1P62046 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lrch1P62046 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.5■□□□□ 0.87
Lrch1P62046 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.5■□□□□ 0.87
Lrch1P62046 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lrch1P62046 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC20.5■□□□□ 0.87
Lrch1P62046 Gm10052-201ENSMUST00000168019 960 ntBASIC20.5■□□□□ 0.87
Lrch1P62046 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lrch1P62046 AC159301.1-201ENSMUST00000225130 1182 ntBASIC20.5■□□□□ 0.87
Lrch1P62046 Gm7729-201ENSMUST00000050143 801 ntBASIC20.5■□□□□ 0.87
Lrch1P62046 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Lrch1P62046 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lrch1P62046 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lrch1P62046 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lrch1P62046 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lrch1P62046 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
Lrch1P62046 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrch1P62046 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrch1P62046 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrch1P62046 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrch1P62046 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrch1P62046 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC20.49■□□□□ 0.87
Lrch1P62046 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
Lrch1P62046 Gm9449-201ENSMUST00000207265 1011 ntBASIC20.49■□□□□ 0.87
Lrch1P62046 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrch1P62046 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lrch1P62046 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lrch1P62046 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrch1P62046 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrch1P62046 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Lrch1P62046 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lrch1P62046 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lrch1P62046 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC20.48■□□□□ 0.87
Lrch1P62046 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lrch1P62046 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lrch1P62046 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC20.48■□□□□ 0.87
Lrch1P62046 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lrch1P62046 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lrch1P62046 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Lrch1P62046 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lrch1P62046 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC20.48■□□□□ 0.87
Lrch1P62046 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lrch1P62046 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lrch1P62046 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lrch1P62046 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lrch1P62046 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Lrch1P62046 Gm15372-201ENSMUST00000120729 834 ntBASIC20.47■□□□□ 0.87
Lrch1P62046 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC20.47■□□□□ 0.87
Lrch1P62046 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Lrch1P62046 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC20.47■□□□□ 0.87
Lrch1P62046 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.47■□□□□ 0.87
Lrch1P62046 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lrch1P62046 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC20.47■□□□□ 0.87
Lrch1P62046 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lrch1P62046 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lrch1P62046 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lrch1P62046 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lrch1P62046 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lrch1P62046 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lrch1P62046 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lrch1P62046 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
Lrch1P62046 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lrch1P62046 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lrch1P62046 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC20.46■□□□□ 0.87
Lrch1P62046 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC20.46■□□□□ 0.87
Lrch1P62046 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Lrch1P62046 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lrch1P62046 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lrch1P62046 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lrch1P62046 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lrch1P62046 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Lrch1P62046 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.45■□□□□ 0.86
Lrch1P62046 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lrch1P62046 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.45■□□□□ 0.86
Lrch1P62046 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Lrch1P62046 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lrch1P62046 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Lrch1P62046 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Lrch1P62046 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lrch1P62046 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Lrch1P62046 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC20.45■□□□□ 0.86
Lrch1P62046 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Lrch1P62046 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms