Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Sec61a1P61620 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a1P61620 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a1P61620 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a1P61620 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a1P61620 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a1P61620 Gm26524-201ENSMUST00000192339 390 ntBASIC15.35■□□□□ 0.05
Sec61a1P61620 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.35■□□□□ 0.05
Sec61a1P61620 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a1P61620 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Sec61a1P61620 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a1P61620 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a1P61620 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a1P61620 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a1P61620 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Sec61a1P61620 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.35■□□□□ 0.05
Sec61a1P61620 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a1P61620 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a1P61620 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a1P61620 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a1P61620 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a1P61620 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Sec61a1P61620 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Sec61a1P61620 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.35■□□□□ 0.05
Sec61a1P61620 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a1P61620 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a1P61620 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a1P61620 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.34■□□□□ 0.05
Sec61a1P61620 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sec61a1P61620 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sec61a1P61620 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sec61a1P61620 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sec61a1P61620 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sec61a1P61620 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sec61a1P61620 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sec61a1P61620 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Sec61a1P61620 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sec61a1P61620 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sec61a1P61620 Gm12527-201ENSMUST00000117967 564 ntBASIC15.34■□□□□ 0.05
Sec61a1P61620 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.34■□□□□ 0.05
Sec61a1P61620 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Sec61a1P61620 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.34■□□□□ 0.05
Sec61a1P61620 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Sec61a1P61620 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.34■□□□□ 0.05
Sec61a1P61620 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sec61a1P61620 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sec61a1P61620 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sec61a1P61620 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sec61a1P61620 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sec61a1P61620 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sec61a1P61620 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Sec61a1P61620 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sec61a1P61620 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sec61a1P61620 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sec61a1P61620 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Sec61a1P61620 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Sec61a1P61620 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Sec61a1P61620 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.33■□□□□ 0.04
Sec61a1P61620 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sec61a1P61620 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sec61a1P61620 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sec61a1P61620 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sec61a1P61620 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sec61a1P61620 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sec61a1P61620 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Sec61a1P61620 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Sec61a1P61620 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.32■□□□□ 0.04
Sec61a1P61620 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a1P61620 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a1P61620 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Sec61a1P61620 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a1P61620 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
Sec61a1P61620 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a1P61620 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a1P61620 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Sec61a1P61620 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a1P61620 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a1P61620 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Sec61a1P61620 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a1P61620 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a1P61620 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a1P61620 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a1P61620 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.32■□□□□ 0.04
Sec61a1P61620 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a1P61620 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Sec61a1P61620 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Sec61a1P61620 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a1P61620 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a1P61620 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a1P61620 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Sec61a1P61620 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a1P61620 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a1P61620 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a1P61620 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a1P61620 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a1P61620 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a1P61620 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a1P61620 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Sec61a1P61620 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a1P61620 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms