Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp3P58854 Gm29257-201ENSMUST00000186115 639 ntBASIC17.79■□□□□ 0.44
Tubgcp3P58854 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp3P58854 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp3P58854 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp3P58854 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp3P58854 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Tubgcp3P58854 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Tubgcp3P58854 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp3P58854 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp3P58854 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp3P58854 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp3P58854 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp3P58854 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp3P58854 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp3P58854 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Tubgcp3P58854 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp3P58854 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp3P58854 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp3P58854 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Tubgcp3P58854 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp3P58854 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Tubgcp3P58854 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp3P58854 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp3P58854 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.78■□□□□ 0.44
Tubgcp3P58854 Gm12527-201ENSMUST00000117967 564 ntBASIC17.78■□□□□ 0.44
Tubgcp3P58854 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp3P58854 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp3P58854 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp3P58854 Mir8112-201ENSMUST00000184382 131 ntBASIC17.78■□□□□ 0.44
Tubgcp3P58854 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Tubgcp3P58854 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.78■□□□□ 0.44
Tubgcp3P58854 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Tubgcp3P58854 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp3P58854 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp3P58854 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Tubgcp3P58854 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp3P58854 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp3P58854 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp3P58854 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp3P58854 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp3P58854 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp3P58854 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tubgcp3P58854 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Tubgcp3P58854 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tubgcp3P58854 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tubgcp3P58854 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tubgcp3P58854 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tubgcp3P58854 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tubgcp3P58854 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tubgcp3P58854 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tubgcp3P58854 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Tubgcp3P58854 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tubgcp3P58854 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Tubgcp3P58854 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tubgcp3P58854 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tubgcp3P58854 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Tubgcp3P58854 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tubgcp3P58854 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tubgcp3P58854 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
Tubgcp3P58854 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Tubgcp3P58854 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Tubgcp3P58854 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.76■□□□□ 0.43
Tubgcp3P58854 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubgcp3P58854 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.76■□□□□ 0.43
Tubgcp3P58854 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Tubgcp3P58854 Gm11643-201ENSMUST00000119578 864 ntBASIC17.76■□□□□ 0.43
Tubgcp3P58854 Gm37856-201ENSMUST00000191634 999 ntBASIC17.76■□□□□ 0.43
Tubgcp3P58854 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubgcp3P58854 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubgcp3P58854 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.76■□□□□ 0.43
Tubgcp3P58854 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubgcp3P58854 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubgcp3P58854 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubgcp3P58854 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubgcp3P58854 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubgcp3P58854 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubgcp3P58854 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tubgcp3P58854 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Tubgcp3P58854 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubgcp3P58854 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubgcp3P58854 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubgcp3P58854 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tubgcp3P58854 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tubgcp3P58854 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubgcp3P58854 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tubgcp3P58854 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tubgcp3P58854 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubgcp3P58854 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubgcp3P58854 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubgcp3P58854 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubgcp3P58854 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubgcp3P58854 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubgcp3P58854 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubgcp3P58854 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubgcp3P58854 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubgcp3P58854 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Tubgcp3P58854 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubgcp3P58854 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Tubgcp3P58854 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms