Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Sssca1P56873 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sssca1P56873 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sssca1P56873 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sssca1P56873 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sssca1P56873 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Sssca1P56873 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sssca1P56873 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.1□□□□□ -0.15
Sssca1P56873 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Sssca1P56873 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sssca1P56873 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sssca1P56873 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Sssca1P56873 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sssca1P56873 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sssca1P56873 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sssca1P56873 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.1□□□□□ -0.15
Sssca1P56873 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.1□□□□□ -0.15
Sssca1P56873 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.1□□□□□ -0.15
Sssca1P56873 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sssca1P56873 Gm10493-201ENSMUST00000097270 612 ntBASIC14.1□□□□□ -0.15
Sssca1P56873 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.1□□□□□ -0.15
Sssca1P56873 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sssca1P56873 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sssca1P56873 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sssca1P56873 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sssca1P56873 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sssca1P56873 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sssca1P56873 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Sssca1P56873 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sssca1P56873 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sssca1P56873 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sssca1P56873 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sssca1P56873 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sssca1P56873 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sssca1P56873 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sssca1P56873 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sssca1P56873 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sssca1P56873 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sssca1P56873 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sssca1P56873 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sssca1P56873 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sssca1P56873 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.09□□□□□ -0.15
Sssca1P56873 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sssca1P56873 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.09□□□□□ -0.15
Sssca1P56873 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sssca1P56873 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sssca1P56873 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sssca1P56873 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sssca1P56873 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Sssca1P56873 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.09□□□□□ -0.15
Sssca1P56873 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sssca1P56873 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.09□□□□□ -0.15
Sssca1P56873 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sssca1P56873 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sssca1P56873 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sssca1P56873 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sssca1P56873 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sssca1P56873 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.09□□□□□ -0.15
Sssca1P56873 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sssca1P56873 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sssca1P56873 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sssca1P56873 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sssca1P56873 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sssca1P56873 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sssca1P56873 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sssca1P56873 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sssca1P56873 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Sssca1P56873 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sssca1P56873 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Sssca1P56873 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.08□□□□□ -0.16
Sssca1P56873 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sssca1P56873 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sssca1P56873 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sssca1P56873 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sssca1P56873 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sssca1P56873 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sssca1P56873 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sssca1P56873 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.07□□□□□ -0.16
Sssca1P56873 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sssca1P56873 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sssca1P56873 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sssca1P56873 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.07□□□□□ -0.16
Sssca1P56873 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sssca1P56873 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Sssca1P56873 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.07□□□□□ -0.16
Sssca1P56873 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.07□□□□□ -0.16
Sssca1P56873 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.07□□□□□ -0.16
Sssca1P56873 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sssca1P56873 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sssca1P56873 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Sssca1P56873 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sssca1P56873 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sssca1P56873 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sssca1P56873 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sssca1P56873 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sssca1P56873 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Sssca1P56873 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sssca1P56873 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Sssca1P56873 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sssca1P56873 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms