Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab4aP56371 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab4aP56371 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab4aP56371 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC13.81□□□□□ -0.2
Rab4aP56371 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC13.81□□□□□ -0.2
Rab4aP56371 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rab4aP56371 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab4aP56371 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab4aP56371 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab4aP56371 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab4aP56371 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab4aP56371 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab4aP56371 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab4aP56371 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rab4aP56371 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rab4aP56371 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab4aP56371 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Rab4aP56371 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rab4aP56371 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rab4aP56371 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab4aP56371 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab4aP56371 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab4aP56371 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Rab4aP56371 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab4aP56371 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab4aP56371 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab4aP56371 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab4aP56371 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab4aP56371 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab4aP56371 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab4aP56371 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab4aP56371 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab4aP56371 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab4aP56371 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab4aP56371 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab4aP56371 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab4aP56371 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab4aP56371 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rab4aP56371 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab4aP56371 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab4aP56371 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Rab4aP56371 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rab4aP56371 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Rab4aP56371 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab4aP56371 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab4aP56371 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab4aP56371 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Rab4aP56371 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rab4aP56371 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab4aP56371 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC13.79□□□□□ -0.2
Rab4aP56371 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab4aP56371 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Rab4aP56371 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab4aP56371 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Rab4aP56371 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab4aP56371 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC13.79□□□□□ -0.2
Rab4aP56371 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab4aP56371 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Rab4aP56371 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab4aP56371 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rab4aP56371 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rab4aP56371 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Rab4aP56371 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab4aP56371 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Rab4aP56371 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab4aP56371 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rab4aP56371 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rab4aP56371 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Rab4aP56371 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.78□□□□□ -0.2
Rab4aP56371 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rab4aP56371 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Rab4aP56371 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab4aP56371 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rab4aP56371 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Rab4aP56371 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Rab4aP56371 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab4aP56371 Gm5921-201ENSMUST00000075898 882 ntBASIC13.78□□□□□ -0.2
Rab4aP56371 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC13.78□□□□□ -0.2
Rab4aP56371 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab4aP56371 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab4aP56371 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab4aP56371 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab4aP56371 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC13.78□□□□□ -0.2
Rab4aP56371 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab4aP56371 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab4aP56371 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rab4aP56371 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Rab4aP56371 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rab4aP56371 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Rab4aP56371 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rab4aP56371 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rab4aP56371 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rab4aP56371 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rab4aP56371 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rab4aP56371 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rab4aP56371 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Rab4aP56371 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rab4aP56371 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rab4aP56371 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rab4aP56371 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms