Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rrp1P56183 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rrp1P56183 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.67■□□□□ 0.74
Rrp1P56183 Gm37179-201ENSMUST00000194862 823 ntBASIC19.67■□□□□ 0.74
Rrp1P56183 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rrp1P56183 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Rrp1P56183 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rrp1P56183 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rrp1P56183 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rrp1P56183 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rrp1P56183 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rrp1P56183 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rrp1P56183 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rrp1P56183 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Rrp1P56183 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rrp1P56183 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Rrp1P56183 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rrp1P56183 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Rrp1P56183 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rrp1P56183 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rrp1P56183 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Rrp1P56183 Gm29257-201ENSMUST00000186115 639 ntBASIC19.66■□□□□ 0.74
Rrp1P56183 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rrp1P56183 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Rrp1P56183 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rrp1P56183 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rrp1P56183 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Rrp1P56183 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rrp1P56183 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rrp1P56183 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.66■□□□□ 0.74
Rrp1P56183 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rrp1P56183 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rrp1P56183 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rrp1P56183 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Rrp1P56183 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Rrp1P56183 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.65■□□□□ 0.74
Rrp1P56183 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rrp1P56183 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rrp1P56183 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.65■□□□□ 0.74
Rrp1P56183 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Rrp1P56183 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rrp1P56183 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rrp1P56183 Gm26524-201ENSMUST00000192339 390 ntBASIC19.65■□□□□ 0.74
Rrp1P56183 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.65■□□□□ 0.74
Rrp1P56183 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rrp1P56183 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rrp1P56183 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rrp1P56183 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Rrp1P56183 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rrp1P56183 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rrp1P56183 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rrp1P56183 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rrp1P56183 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rrp1P56183 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Rrp1P56183 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.64■□□□□ 0.73
Rrp1P56183 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.64■□□□□ 0.73
Rrp1P56183 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.64■□□□□ 0.73
Rrp1P56183 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Rrp1P56183 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rrp1P56183 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Rrp1P56183 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rrp1P56183 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rrp1P56183 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rrp1P56183 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rrp1P56183 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Rrp1P56183 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rrp1P56183 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.63■□□□□ 0.73
Rrp1P56183 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rrp1P56183 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rrp1P56183 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Rrp1P56183 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rrp1P56183 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rrp1P56183 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rrp1P56183 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rrp1P56183 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rrp1P56183 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rrp1P56183 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rrp1P56183 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.62■□□□□ 0.73
Rrp1P56183 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rrp1P56183 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Rrp1P56183 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Rrp1P56183 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.62■□□□□ 0.73
Rrp1P56183 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.62■□□□□ 0.73
Rrp1P56183 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rrp1P56183 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rrp1P56183 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rrp1P56183 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rrp1P56183 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rrp1P56183 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rrp1P56183 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rrp1P56183 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rrp1P56183 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rrp1P56183 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rrp1P56183 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rrp1P56183 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rrp1P56183 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rrp1P56183 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rrp1P56183 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rrp1P56183 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rrp1P56183 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms