Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Atxn1P54254 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.27■□□□□ 0.35
Atxn1P54254 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Atxn1P54254 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Atxn1P54254 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atxn1P54254 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atxn1P54254 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Atxn1P54254 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atxn1P54254 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Atxn1P54254 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atxn1P54254 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atxn1P54254 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atxn1P54254 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Atxn1P54254 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Atxn1P54254 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Atxn1P54254 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.26■□□□□ 0.35
Atxn1P54254 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Atxn1P54254 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.26■□□□□ 0.35
Atxn1P54254 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Atxn1P54254 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.26■□□□□ 0.35
Atxn1P54254 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atxn1P54254 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atxn1P54254 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.26■□□□□ 0.35
Atxn1P54254 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atxn1P54254 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atxn1P54254 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atxn1P54254 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atxn1P54254 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atxn1P54254 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atxn1P54254 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atxn1P54254 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Atxn1P54254 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Atxn1P54254 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Atxn1P54254 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atxn1P54254 Gm16061-201ENSMUST00000122167 857 ntBASIC17.25■□□□□ 0.35
Atxn1P54254 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.25■□□□□ 0.35
Atxn1P54254 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atxn1P54254 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.25■□□□□ 0.35
Atxn1P54254 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Atxn1P54254 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atxn1P54254 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Atxn1P54254 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atxn1P54254 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atxn1P54254 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atxn1P54254 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atxn1P54254 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.25■□□□□ 0.35
Atxn1P54254 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Atxn1P54254 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.25■□□□□ 0.35
Atxn1P54254 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atxn1P54254 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atxn1P54254 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Atxn1P54254 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atxn1P54254 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Atxn1P54254 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Atxn1P54254 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atxn1P54254 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atxn1P54254 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atxn1P54254 Gm24589-201ENSMUST00000116692 94 ntBASIC17.24■□□□□ 0.35
Atxn1P54254 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Atxn1P54254 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atxn1P54254 Gm21559-201ENSMUST00000220638 855 ntBASIC17.24■□□□□ 0.35
Atxn1P54254 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atxn1P54254 Gm8587-201ENSMUST00000076538 843 ntBASIC17.24■□□□□ 0.35
Atxn1P54254 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atxn1P54254 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atxn1P54254 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atxn1P54254 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atxn1P54254 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atxn1P54254 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atxn1P54254 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Atxn1P54254 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Atxn1P54254 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Atxn1P54254 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.23■□□□□ 0.35
Atxn1P54254 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Atxn1P54254 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atxn1P54254 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Atxn1P54254 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atxn1P54254 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atxn1P54254 Gm9013-201ENSMUST00000132939 882 ntBASIC17.23■□□□□ 0.35
Atxn1P54254 Gm17808-201ENSMUST00000200859 894 ntBASIC17.23■□□□□ 0.35
Atxn1P54254 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Atxn1P54254 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atxn1P54254 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atxn1P54254 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Atxn1P54254 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Atxn1P54254 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atxn1P54254 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atxn1P54254 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Atxn1P54254 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Atxn1P54254 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Atxn1P54254 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Atxn1P54254 Gm27389-201ENSMUST00000183622 195 ntBASIC17.22■□□□□ 0.35
Atxn1P54254 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.22■□□□□ 0.35
Atxn1P54254 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atxn1P54254 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atxn1P54254 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atxn1P54254 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Atxn1P54254 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.22■□□□□ 0.35
Atxn1P54254 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atxn1P54254 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms