Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Sox3P53784 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox3P53784 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox3P53784 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox3P53784 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Sox3P53784 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox3P53784 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox3P53784 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox3P53784 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sox3P53784 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sox3P53784 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.65■□□□□ 0.26
Sox3P53784 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox3P53784 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox3P53784 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.65■□□□□ 0.26
Sox3P53784 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox3P53784 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox3P53784 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sox3P53784 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sox3P53784 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox3P53784 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sox3P53784 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox3P53784 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Sox3P53784 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Sox3P53784 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox3P53784 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox3P53784 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox3P53784 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sox3P53784 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox3P53784 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.64■□□□□ 0.25
Sox3P53784 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.64■□□□□ 0.25
Sox3P53784 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Sox3P53784 Gm18959-201ENSMUST00000208954 655 ntBASIC16.64■□□□□ 0.25
Sox3P53784 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.64■□□□□ 0.25
Sox3P53784 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.64■□□□□ 0.25
Sox3P53784 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.64■□□□□ 0.25
Sox3P53784 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.64■□□□□ 0.25
Sox3P53784 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox3P53784 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sox3P53784 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.64■□□□□ 0.25
Sox3P53784 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Sox3P53784 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.64■□□□□ 0.25
Sox3P53784 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sox3P53784 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox3P53784 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Sox3P53784 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox3P53784 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox3P53784 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox3P53784 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox3P53784 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox3P53784 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sox3P53784 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Sox3P53784 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sox3P53784 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.63■□□□□ 0.25
Sox3P53784 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox3P53784 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.63■□□□□ 0.25
Sox3P53784 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Sox3P53784 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Sox3P53784 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox3P53784 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox3P53784 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sox3P53784 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sox3P53784 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox3P53784 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox3P53784 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox3P53784 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Sox3P53784 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox3P53784 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox3P53784 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.62■□□□□ 0.25
Sox3P53784 Gm14859-201ENSMUST00000117752 357 ntBASIC16.62■□□□□ 0.25
Sox3P53784 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sox3P53784 Gm17971-201ENSMUST00000190239 806 ntBASIC16.62■□□□□ 0.25
Sox3P53784 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.62■□□□□ 0.25
Sox3P53784 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.62■□□□□ 0.25
Sox3P53784 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sox3P53784 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox3P53784 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox3P53784 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox3P53784 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox3P53784 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox3P53784 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox3P53784 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox3P53784 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Sox3P53784 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sox3P53784 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.61■□□□□ 0.25
Sox3P53784 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.61■□□□□ 0.25
Sox3P53784 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox3P53784 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox3P53784 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Sox3P53784 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sox3P53784 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sox3P53784 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox3P53784 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox3P53784 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Sox3P53784 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sox3P53784 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox3P53784 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sox3P53784 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox3P53784 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox3P53784 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox3P53784 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms