Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ercc3P49135 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ercc3P49135 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Ercc3P49135 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.64■□□□□ 0.9
Ercc3P49135 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ercc3P49135 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ercc3P49135 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ercc3P49135 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ercc3P49135 Gm5417-201ENSMUST00000079706 384 ntBASIC20.64■□□□□ 0.89
Ercc3P49135 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Ercc3P49135 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.64■□□□□ 0.89
Ercc3P49135 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ercc3P49135 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ercc3P49135 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ercc3P49135 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ercc3P49135 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ercc3P49135 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ercc3P49135 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ercc3P49135 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ercc3P49135 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.63■□□□□ 0.89
Ercc3P49135 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ercc3P49135 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ercc3P49135 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ercc3P49135 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ercc3P49135 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ercc3P49135 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ercc3P49135 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ercc3P49135 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ercc3P49135 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ercc3P49135 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ercc3P49135 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.62■□□□□ 0.89
Ercc3P49135 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ercc3P49135 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ercc3P49135 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ercc3P49135 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ercc3P49135 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.62■□□□□ 0.89
Ercc3P49135 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ercc3P49135 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ercc3P49135 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.62■□□□□ 0.89
Ercc3P49135 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.62■□□□□ 0.89
Ercc3P49135 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.62■□□□□ 0.89
Ercc3P49135 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.62■□□□□ 0.89
Ercc3P49135 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ercc3P49135 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.62■□□□□ 0.89
Ercc3P49135 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.62■□□□□ 0.89
Ercc3P49135 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Ercc3P49135 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ercc3P49135 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ercc3P49135 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ercc3P49135 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ercc3P49135 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ercc3P49135 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.61■□□□□ 0.89
Ercc3P49135 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ercc3P49135 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
Ercc3P49135 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ercc3P49135 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ercc3P49135 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.61■□□□□ 0.89
Ercc3P49135 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.61■□□□□ 0.89
Ercc3P49135 Gm4974-201ENSMUST00000209974 875 ntBASIC20.61■□□□□ 0.89
Ercc3P49135 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ercc3P49135 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ercc3P49135 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ercc3P49135 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ercc3P49135 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ercc3P49135 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ercc3P49135 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.61■□□□□ 0.89
Ercc3P49135 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ercc3P49135 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ercc3P49135 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Ercc3P49135 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Ercc3P49135 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ercc3P49135 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ercc3P49135 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ercc3P49135 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ercc3P49135 Gm15565-201ENSMUST00000118890 427 ntBASIC20.6■□□□□ 0.89
Ercc3P49135 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.6■□□□□ 0.89
Ercc3P49135 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ercc3P49135 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ercc3P49135 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Ercc3P49135 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ercc3P49135 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ercc3P49135 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Ercc3P49135 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ercc3P49135 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Ercc3P49135 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ercc3P49135 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ercc3P49135 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ercc3P49135 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ercc3P49135 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ercc3P49135 Gm10418-201ENSMUST00000100943 576 ntBASIC20.59■□□□□ 0.89
Ercc3P49135 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.59■□□□□ 0.89
Ercc3P49135 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.59■□□□□ 0.89
Ercc3P49135 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ercc3P49135 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ercc3P49135 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ercc3P49135 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ercc3P49135 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ercc3P49135 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ercc3P49135 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ercc3P49135 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms