Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rfx3P48381 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
Rfx3P48381 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfx3P48381 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rfx3P48381 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
Rfx3P48381 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
Rfx3P48381 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfx3P48381 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfx3P48381 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.76■□□□□ 0.11
Rfx3P48381 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.76■□□□□ 0.11
Rfx3P48381 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfx3P48381 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.76■□□□□ 0.11
Rfx3P48381 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfx3P48381 Gm44549-201ENSMUST00000208351 577 ntBASIC15.76■□□□□ 0.11
Rfx3P48381 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.76■□□□□ 0.11
Rfx3P48381 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.76■□□□□ 0.11
Rfx3P48381 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfx3P48381 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfx3P48381 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfx3P48381 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfx3P48381 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.76■□□□□ 0.11
Rfx3P48381 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Rfx3P48381 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rfx3P48381 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Rfx3P48381 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.75■□□□□ 0.11
Rfx3P48381 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rfx3P48381 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rfx3P48381 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rfx3P48381 Rab3c-203ENSMUST00000224180 967 ntBASIC15.75■□□□□ 0.11
Rfx3P48381 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rfx3P48381 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Rfx3P48381 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Rfx3P48381 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Rfx3P48381 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rfx3P48381 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Rfx3P48381 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Rfx3P48381 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rfx3P48381 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rfx3P48381 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rfx3P48381 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rfx3P48381 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rfx3P48381 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Rfx3P48381 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rfx3P48381 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rfx3P48381 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Rfx3P48381 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rfx3P48381 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rfx3P48381 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rfx3P48381 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rfx3P48381 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rfx3P48381 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rfx3P48381 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rfx3P48381 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfx3P48381 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfx3P48381 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Rfx3P48381 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rfx3P48381 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfx3P48381 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfx3P48381 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfx3P48381 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfx3P48381 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Rfx3P48381 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Rfx3P48381 Gm26524-201ENSMUST00000192339 390 ntBASIC15.73■□□□□ 0.11
Rfx3P48381 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.73■□□□□ 0.11
Rfx3P48381 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.73■□□□□ 0.11
Rfx3P48381 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rfx3P48381 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfx3P48381 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rfx3P48381 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfx3P48381 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfx3P48381 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfx3P48381 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfx3P48381 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfx3P48381 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfx3P48381 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rfx3P48381 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfx3P48381 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfx3P48381 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfx3P48381 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx3P48381 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx3P48381 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Rfx3P48381 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx3P48381 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx3P48381 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx3P48381 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Rfx3P48381 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx3P48381 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx3P48381 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.72■□□□□ 0.11
Rfx3P48381 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx3P48381 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx3P48381 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Rfx3P48381 Gm5408-201ENSMUST00000197998 747 ntBASIC15.72■□□□□ 0.11
Rfx3P48381 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.72■□□□□ 0.11
Rfx3P48381 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx3P48381 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Rfx3P48381 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx3P48381 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx3P48381 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Rfx3P48381 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx3P48381 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms