Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rph3aP47708 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rph3aP47708 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rph3aP47708 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rph3aP47708 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rph3aP47708 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rph3aP47708 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rph3aP47708 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rph3aP47708 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rph3aP47708 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Rph3aP47708 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rph3aP47708 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rph3aP47708 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.77■□□□□ 0.28
Rph3aP47708 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.77■□□□□ 0.28
Rph3aP47708 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rph3aP47708 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rph3aP47708 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Rph3aP47708 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rph3aP47708 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.76■□□□□ 0.27
Rph3aP47708 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
Rph3aP47708 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rph3aP47708 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rph3aP47708 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rph3aP47708 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rph3aP47708 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rph3aP47708 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rph3aP47708 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rph3aP47708 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Rph3aP47708 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rph3aP47708 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rph3aP47708 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.76■□□□□ 0.27
Rph3aP47708 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rph3aP47708 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rph3aP47708 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rph3aP47708 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rph3aP47708 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rph3aP47708 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rph3aP47708 Gm10698-201ENSMUST00000182663 604 ntBASIC16.75■□□□□ 0.27
Rph3aP47708 Gm37292-201ENSMUST00000192062 758 ntBASIC16.75■□□□□ 0.27
Rph3aP47708 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.75■□□□□ 0.27
Rph3aP47708 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.75■□□□□ 0.27
Rph3aP47708 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Rph3aP47708 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rph3aP47708 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rph3aP47708 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rph3aP47708 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rph3aP47708 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rph3aP47708 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Rph3aP47708 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rph3aP47708 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rph3aP47708 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rph3aP47708 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rph3aP47708 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Rph3aP47708 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rph3aP47708 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rph3aP47708 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rph3aP47708 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rph3aP47708 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rph3aP47708 Gm13401-201ENSMUST00000117074 291 ntBASIC16.74■□□□□ 0.27
Rph3aP47708 Gm6576-201ENSMUST00000169678 883 ntBASIC16.74■□□□□ 0.27
Rph3aP47708 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Rph3aP47708 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.74■□□□□ 0.27
Rph3aP47708 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rph3aP47708 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rph3aP47708 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rph3aP47708 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rph3aP47708 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Rph3aP47708 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.73■□□□□ 0.27
Rph3aP47708 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rph3aP47708 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rph3aP47708 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rph3aP47708 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.73■□□□□ 0.27
Rph3aP47708 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rph3aP47708 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Rph3aP47708 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rph3aP47708 Gm22240-201ENSMUST00000175225 82 ntBASIC16.73■□□□□ 0.27
Rph3aP47708 Gm43183-201ENSMUST00000200632 547 ntBASIC16.73■□□□□ 0.27
Rph3aP47708 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rph3aP47708 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.73■□□□□ 0.27
Rph3aP47708 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rph3aP47708 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rph3aP47708 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rph3aP47708 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rph3aP47708 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rph3aP47708 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rph3aP47708 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rph3aP47708 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.73■□□□□ 0.27
Rph3aP47708 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rph3aP47708 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rph3aP47708 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rph3aP47708 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rph3aP47708 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rph3aP47708 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rph3aP47708 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rph3aP47708 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rph3aP47708 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rph3aP47708 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rph3aP47708 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rph3aP47708 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.72■□□□□ 0.27
Rph3aP47708 Gm12382-201ENSMUST00000122005 922 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms