Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Msh2P43247 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Msh2P43247 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Msh2P43247 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Msh2P43247 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Msh2P43247 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.96■□□□□ 0.46
Msh2P43247 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Msh2P43247 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Msh2P43247 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Msh2P43247 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Msh2P43247 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.95■□□□□ 0.46
Msh2P43247 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Msh2P43247 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Msh2P43247 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Msh2P43247 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Msh2P43247 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.95■□□□□ 0.46
Msh2P43247 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Msh2P43247 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.95■□□□□ 0.46
Msh2P43247 Gm44549-201ENSMUST00000208351 577 ntBASIC17.95■□□□□ 0.46
Msh2P43247 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.95■□□□□ 0.46
Msh2P43247 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Msh2P43247 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Msh2P43247 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Msh2P43247 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Msh2P43247 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Msh2P43247 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Msh2P43247 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Msh2P43247 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Msh2P43247 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Msh2P43247 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.95■□□□□ 0.46
Msh2P43247 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Msh2P43247 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Msh2P43247 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Msh2P43247 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Msh2P43247 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Msh2P43247 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.94■□□□□ 0.46
Msh2P43247 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.94■□□□□ 0.46
Msh2P43247 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Msh2P43247 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.94■□□□□ 0.46
Msh2P43247 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Msh2P43247 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Msh2P43247 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Msh2P43247 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Msh2P43247 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh2P43247 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh2P43247 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh2P43247 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Msh2P43247 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.93■□□□□ 0.46
Msh2P43247 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh2P43247 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Msh2P43247 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh2P43247 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh2P43247 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh2P43247 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Msh2P43247 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Msh2P43247 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Msh2P43247 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Msh2P43247 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Msh2P43247 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.92■□□□□ 0.46
Msh2P43247 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Msh2P43247 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.92■□□□□ 0.46
Msh2P43247 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.92■□□□□ 0.46
Msh2P43247 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.92■□□□□ 0.46
Msh2P43247 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Msh2P43247 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Msh2P43247 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Msh2P43247 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Msh2P43247 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Msh2P43247 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Msh2P43247 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh2P43247 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh2P43247 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Msh2P43247 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Msh2P43247 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh2P43247 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh2P43247 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh2P43247 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh2P43247 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Msh2P43247 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.91■□□□□ 0.46
Msh2P43247 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Msh2P43247 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.91■□□□□ 0.46
Msh2P43247 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Msh2P43247 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.91■□□□□ 0.46
Msh2P43247 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Msh2P43247 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh2P43247 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh2P43247 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh2P43247 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh2P43247 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Msh2P43247 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh2P43247 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Msh2P43247 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh2P43247 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh2P43247 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Msh2P43247 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh2P43247 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Msh2P43247 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Msh2P43247 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh2P43247 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.9■□□□□ 0.46
Msh2P43247 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms