Protein–RNA interactions for Protein: P43028

Gdf6, Growth/differentiation factor 6, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gdf6P43028 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Gdf6P43028 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gdf6P43028 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gdf6P43028 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gdf6P43028 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gdf6P43028 Gm13474-201ENSMUST00000122466 815 ntBASIC18.32■□□□□ 0.52
Gdf6P43028 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Gdf6P43028 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gdf6P43028 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Gdf6P43028 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gdf6P43028 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gdf6P43028 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Gdf6P43028 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Gdf6P43028 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.31■□□□□ 0.52
Gdf6P43028 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gdf6P43028 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gdf6P43028 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gdf6P43028 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Gdf6P43028 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gdf6P43028 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gdf6P43028 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Gdf6P43028 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gdf6P43028 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Gdf6P43028 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.31■□□□□ 0.52
Gdf6P43028 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.31■□□□□ 0.52
Gdf6P43028 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gdf6P43028 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gdf6P43028 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.31■□□□□ 0.52
Gdf6P43028 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gdf6P43028 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Gdf6P43028 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gdf6P43028 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gdf6P43028 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gdf6P43028 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gdf6P43028 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gdf6P43028 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gdf6P43028 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gdf6P43028 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gdf6P43028 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gdf6P43028 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gdf6P43028 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gdf6P43028 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gdf6P43028 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Gdf6P43028 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Gdf6P43028 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.3■□□□□ 0.52
Gdf6P43028 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gdf6P43028 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gdf6P43028 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gdf6P43028 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gdf6P43028 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gdf6P43028 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gdf6P43028 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gdf6P43028 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Gdf6P43028 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Gdf6P43028 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gdf6P43028 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.29■□□□□ 0.52
Gdf6P43028 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gdf6P43028 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gdf6P43028 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gdf6P43028 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.29■□□□□ 0.52
Gdf6P43028 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Gdf6P43028 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Gdf6P43028 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Gdf6P43028 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.29■□□□□ 0.52
Gdf6P43028 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gdf6P43028 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Gdf6P43028 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gdf6P43028 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gdf6P43028 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gdf6P43028 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gdf6P43028 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gdf6P43028 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gdf6P43028 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gdf6P43028 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Gdf6P43028 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
Gdf6P43028 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.28■□□□□ 0.52
Gdf6P43028 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gdf6P43028 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gdf6P43028 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.28■□□□□ 0.52
Gdf6P43028 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gdf6P43028 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.28■□□□□ 0.52
Gdf6P43028 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Gdf6P43028 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gdf6P43028 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gdf6P43028 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gdf6P43028 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gdf6P43028 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.28■□□□□ 0.52
Gdf6P43028 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gdf6P43028 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gdf6P43028 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.27■□□□□ 0.52
Gdf6P43028 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.27■□□□□ 0.52
Gdf6P43028 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gdf6P43028 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gdf6P43028 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Gdf6P43028 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.27■□□□□ 0.52
Gdf6P43028 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gdf6P43028 AA414768-201ENSMUST00000121924 1257 ntBASIC18.27■□□□□ 0.52
Gdf6P43028 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Gdf6P43028 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gdf6P43028 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms