Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cd9P40240 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Cd9P40240 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cd9P40240 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd9P40240 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd9P40240 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd9P40240 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd9P40240 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd9P40240 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd9P40240 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd9P40240 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cd9P40240 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cd9P40240 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.16■□□□□ 0.34
Cd9P40240 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd9P40240 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cd9P40240 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Cd9P40240 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd9P40240 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd9P40240 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd9P40240 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cd9P40240 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cd9P40240 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cd9P40240 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cd9P40240 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cd9P40240 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cd9P40240 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.15■□□□□ 0.34
Cd9P40240 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cd9P40240 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cd9P40240 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cd9P40240 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.15■□□□□ 0.34
Cd9P40240 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cd9P40240 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cd9P40240 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cd9P40240 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cd9P40240 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cd9P40240 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cd9P40240 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cd9P40240 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.14■□□□□ 0.33
Cd9P40240 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cd9P40240 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cd9P40240 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cd9P40240 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cd9P40240 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cd9P40240 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.14■□□□□ 0.33
Cd9P40240 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.14■□□□□ 0.33
Cd9P40240 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.14■□□□□ 0.33
Cd9P40240 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.14■□□□□ 0.33
Cd9P40240 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cd9P40240 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cd9P40240 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cd9P40240 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.14■□□□□ 0.33
Cd9P40240 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd9P40240 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.13■□□□□ 0.33
Cd9P40240 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cd9P40240 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.13■□□□□ 0.33
Cd9P40240 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cd9P40240 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.13■□□□□ 0.33
Cd9P40240 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Cd9P40240 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.13■□□□□ 0.33
Cd9P40240 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cd9P40240 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cd9P40240 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd9P40240 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Cd9P40240 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd9P40240 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cd9P40240 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd9P40240 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Cd9P40240 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd9P40240 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd9P40240 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd9P40240 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd9P40240 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Cd9P40240 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Cd9P40240 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.12■□□□□ 0.33
Cd9P40240 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.12■□□□□ 0.33
Cd9P40240 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Cd9P40240 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.12■□□□□ 0.33
Cd9P40240 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd9P40240 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cd9P40240 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.12■□□□□ 0.33
Cd9P40240 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cd9P40240 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd9P40240 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Cd9P40240 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd9P40240 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cd9P40240 Mir1199-201ENSMUST00000117015 119 ntBASIC17.11■□□□□ 0.33
Cd9P40240 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cd9P40240 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd9P40240 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd9P40240 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd9P40240 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd9P40240 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.11■□□□□ 0.33
Cd9P40240 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cd9P40240 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd9P40240 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd9P40240 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd9P40240 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd9P40240 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Cd9P40240 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd9P40240 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms