Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Mmp13P33435 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Mmp13P33435 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp13P33435 Gm12896-201ENSMUST00000118430 226 ntBASIC17.85■□□□□ 0.45
Mmp13P33435 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Mmp13P33435 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp13P33435 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp13P33435 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp13P33435 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Mmp13P33435 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp13P33435 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp13P33435 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp13P33435 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.85■□□□□ 0.45
Mmp13P33435 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp13P33435 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.85■□□□□ 0.45
Mmp13P33435 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp13P33435 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.85■□□□□ 0.45
Mmp13P33435 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp13P33435 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp13P33435 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp13P33435 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.85■□□□□ 0.45
Mmp13P33435 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp13P33435 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp13P33435 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp13P33435 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp13P33435 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.84■□□□□ 0.45
Mmp13P33435 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp13P33435 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.84■□□□□ 0.45
Mmp13P33435 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Mmp13P33435 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.84■□□□□ 0.45
Mmp13P33435 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp13P33435 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp13P33435 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.84■□□□□ 0.45
Mmp13P33435 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Mmp13P33435 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.84■□□□□ 0.45
Mmp13P33435 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.84■□□□□ 0.45
Mmp13P33435 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp13P33435 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp13P33435 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp13P33435 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Mmp13P33435 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp13P33435 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp13P33435 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp13P33435 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Mmp13P33435 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Mmp13P33435 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.83■□□□□ 0.45
Mmp13P33435 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Mmp13P33435 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Mmp13P33435 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Mmp13P33435 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Mmp13P33435 Trmt13-210ENSMUST00000198454 880 ntBASIC17.83■□□□□ 0.44
Mmp13P33435 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Mmp13P33435 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Mmp13P33435 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.83■□□□□ 0.44
Mmp13P33435 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Mmp13P33435 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Mmp13P33435 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp13P33435 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp13P33435 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp13P33435 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.82■□□□□ 0.44
Mmp13P33435 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Mmp13P33435 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Mmp13P33435 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Mmp13P33435 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp13P33435 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp13P33435 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Mmp13P33435 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp13P33435 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp13P33435 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.82■□□□□ 0.44
Mmp13P33435 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp13P33435 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp13P33435 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp13P33435 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp13P33435 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp13P33435 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp13P33435 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp13P33435 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Mmp13P33435 Gm37856-201ENSMUST00000191634 999 ntBASIC17.81■□□□□ 0.44
Mmp13P33435 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.81■□□□□ 0.44
Mmp13P33435 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp13P33435 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp13P33435 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.81■□□□□ 0.44
Mmp13P33435 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Mmp13P33435 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.81■□□□□ 0.44
Mmp13P33435 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp13P33435 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp13P33435 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp13P33435 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Mmp13P33435 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Mmp13P33435 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp13P33435 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp13P33435 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp13P33435 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.8■□□□□ 0.44
Mmp13P33435 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Mmp13P33435 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mmp13P33435 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Mmp13P33435 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
Mmp13P33435 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mmp13P33435 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.8■□□□□ 0.44
Mmp13P33435 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms