Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rom1P32958 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rom1P32958 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rom1P32958 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Rom1P32958 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rom1P32958 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Rom1P32958 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rom1P32958 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.84□□□□□ -0.19
Rom1P32958 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rom1P32958 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rom1P32958 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Rom1P32958 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rom1P32958 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.83□□□□□ -0.2
Rom1P32958 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.83□□□□□ -0.2
Rom1P32958 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Rom1P32958 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC13.83□□□□□ -0.2
Rom1P32958 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rom1P32958 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Rom1P32958 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rom1P32958 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rom1P32958 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rom1P32958 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rom1P32958 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rom1P32958 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rom1P32958 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rom1P32958 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rom1P32958 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rom1P32958 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Rom1P32958 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rom1P32958 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rom1P32958 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rom1P32958 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rom1P32958 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rom1P32958 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Rom1P32958 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rom1P32958 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rom1P32958 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13.82□□□□□ -0.2
Rom1P32958 Mir8112-201ENSMUST00000184382 131 ntBASIC13.82□□□□□ -0.2
Rom1P32958 AC140930.3-201ENSMUST00000222935 274 ntBASIC13.82□□□□□ -0.2
Rom1P32958 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rom1P32958 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rom1P32958 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rom1P32958 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Rom1P32958 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rom1P32958 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rom1P32958 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rom1P32958 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC13.82□□□□□ -0.2
Rom1P32958 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Rom1P32958 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.82□□□□□ -0.2
Rom1P32958 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rom1P32958 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rom1P32958 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.81□□□□□ -0.2
Rom1P32958 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.81□□□□□ -0.2
Rom1P32958 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Rom1P32958 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rom1P32958 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC13.81□□□□□ -0.2
Rom1P32958 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC13.81□□□□□ -0.2
Rom1P32958 Gm40848-201ENSMUST00000221998 324 ntBASIC13.81□□□□□ -0.2
Rom1P32958 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rom1P32958 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rom1P32958 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rom1P32958 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rom1P32958 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rom1P32958 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rom1P32958 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.81□□□□□ -0.2
Rom1P32958 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rom1P32958 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rom1P32958 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rom1P32958 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rom1P32958 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rom1P32958 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rom1P32958 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rom1P32958 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rom1P32958 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rom1P32958 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rom1P32958 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Rom1P32958 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rom1P32958 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rom1P32958 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rom1P32958 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Rom1P32958 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC13.8□□□□□ -0.2
Rom1P32958 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rom1P32958 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rom1P32958 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rom1P32958 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.8□□□□□ -0.2
Rom1P32958 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Rom1P32958 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Rom1P32958 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rom1P32958 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rom1P32958 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rom1P32958 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rom1P32958 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rom1P32958 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rom1P32958 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rom1P32958 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Rom1P32958 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Rom1P32958 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rom1P32958 Gm29791-202ENSMUST00000207888 369 ntBASIC13.79□□□□□ -0.2
Rom1P32958 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC13.79□□□□□ -0.2
Rom1P32958 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms