Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nedd8P29595 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Nedd8P29595 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Nedd8P29595 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nedd8P29595 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nedd8P29595 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nedd8P29595 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nedd8P29595 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nedd8P29595 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.18■□□□□ 0.18
Nedd8P29595 Gm22238-201ENSMUST00000175222 88 ntBASIC16.18■□□□□ 0.18
Nedd8P29595 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Nedd8P29595 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Nedd8P29595 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Nedd8P29595 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nedd8P29595 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nedd8P29595 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nedd8P29595 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nedd8P29595 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nedd8P29595 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Nedd8P29595 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nedd8P29595 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nedd8P29595 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nedd8P29595 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nedd8P29595 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nedd8P29595 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.17■□□□□ 0.18
Nedd8P29595 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.17■□□□□ 0.18
Nedd8P29595 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Nedd8P29595 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nedd8P29595 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nedd8P29595 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nedd8P29595 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nedd8P29595 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.17■□□□□ 0.18
Nedd8P29595 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.17■□□□□ 0.18
Nedd8P29595 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.17■□□□□ 0.18
Nedd8P29595 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.17■□□□□ 0.18
Nedd8P29595 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.17■□□□□ 0.18
Nedd8P29595 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
Nedd8P29595 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nedd8P29595 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.17■□□□□ 0.18
Nedd8P29595 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Nedd8P29595 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nedd8P29595 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Nedd8P29595 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nedd8P29595 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nedd8P29595 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nedd8P29595 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nedd8P29595 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nedd8P29595 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nedd8P29595 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nedd8P29595 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.16■□□□□ 0.18
Nedd8P29595 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nedd8P29595 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.16■□□□□ 0.18
Nedd8P29595 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.16■□□□□ 0.18
Nedd8P29595 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nedd8P29595 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nedd8P29595 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nedd8P29595 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nedd8P29595 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Nedd8P29595 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.16■□□□□ 0.18
Nedd8P29595 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nedd8P29595 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nedd8P29595 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Nedd8P29595 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nedd8P29595 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nedd8P29595 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nedd8P29595 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nedd8P29595 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nedd8P29595 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Nedd8P29595 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nedd8P29595 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nedd8P29595 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nedd8P29595 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nedd8P29595 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.15■□□□□ 0.18
Nedd8P29595 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.15■□□□□ 0.18
Nedd8P29595 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.15■□□□□ 0.18
Nedd8P29595 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Nedd8P29595 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Nedd8P29595 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Nedd8P29595 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.15■□□□□ 0.18
Nedd8P29595 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Nedd8P29595 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.15■□□□□ 0.18
Nedd8P29595 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nedd8P29595 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nedd8P29595 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Nedd8P29595 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nedd8P29595 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nedd8P29595 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nedd8P29595 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nedd8P29595 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nedd8P29595 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nedd8P29595 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nedd8P29595 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nedd8P29595 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Nedd8P29595 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nedd8P29595 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nedd8P29595 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nedd8P29595 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nedd8P29595 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.14■□□□□ 0.17
Nedd8P29595 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nedd8P29595 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms