Protein–RNA interactions for Protein: P29268

Ctgf, Connective tissue growth factor, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtgfP29268 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CtgfP29268 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CtgfP29268 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CtgfP29268 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CtgfP29268 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CtgfP29268 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CtgfP29268 Gm13559-201ENSMUST00000120476 863 ntBASIC16.21■□□□□ 0.19
CtgfP29268 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CtgfP29268 Gm27463-201ENSMUST00000183569 57 ntBASIC16.21■□□□□ 0.19
CtgfP29268 Mir7071-201ENSMUST00000184847 69 ntBASIC16.21■□□□□ 0.19
CtgfP29268 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.21■□□□□ 0.19
CtgfP29268 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CtgfP29268 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CtgfP29268 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CtgfP29268 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CtgfP29268 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.21■□□□□ 0.19
CtgfP29268 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
CtgfP29268 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CtgfP29268 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CtgfP29268 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.2■□□□□ 0.18
CtgfP29268 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CtgfP29268 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CtgfP29268 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.2■□□□□ 0.18
CtgfP29268 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CtgfP29268 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CtgfP29268 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CtgfP29268 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CtgfP29268 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CtgfP29268 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.2■□□□□ 0.18
CtgfP29268 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CtgfP29268 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
CtgfP29268 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CtgfP29268 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CtgfP29268 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CtgfP29268 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CtgfP29268 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CtgfP29268 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.19■□□□□ 0.18
CtgfP29268 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.19■□□□□ 0.18
CtgfP29268 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CtgfP29268 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CtgfP29268 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.19■□□□□ 0.18
CtgfP29268 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CtgfP29268 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CtgfP29268 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CtgfP29268 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CtgfP29268 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CtgfP29268 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CtgfP29268 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.19■□□□□ 0.18
CtgfP29268 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CtgfP29268 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.19■□□□□ 0.18
CtgfP29268 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CtgfP29268 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CtgfP29268 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CtgfP29268 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CtgfP29268 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CtgfP29268 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.19■□□□□ 0.18
CtgfP29268 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CtgfP29268 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CtgfP29268 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.18■□□□□ 0.18
CtgfP29268 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CtgfP29268 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.18■□□□□ 0.18
CtgfP29268 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.18■□□□□ 0.18
CtgfP29268 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CtgfP29268 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CtgfP29268 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CtgfP29268 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CtgfP29268 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CtgfP29268 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CtgfP29268 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CtgfP29268 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CtgfP29268 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CtgfP29268 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CtgfP29268 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.18■□□□□ 0.18
CtgfP29268 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CtgfP29268 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CtgfP29268 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.17■□□□□ 0.18
CtgfP29268 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CtgfP29268 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CtgfP29268 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.17■□□□□ 0.18
CtgfP29268 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CtgfP29268 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CtgfP29268 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CtgfP29268 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CtgfP29268 Gm6433-201ENSMUST00000118634 875 ntBASIC16.17■□□□□ 0.18
CtgfP29268 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.17■□□□□ 0.18
CtgfP29268 Gm9731-201ENSMUST00000209480 747 ntBASIC16.17■□□□□ 0.18
CtgfP29268 Gm7791-201ENSMUST00000219066 539 ntBASIC16.17■□□□□ 0.18
CtgfP29268 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CtgfP29268 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CtgfP29268 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CtgfP29268 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CtgfP29268 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CtgfP29268 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CtgfP29268 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CtgfP29268 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.17■□□□□ 0.18
CtgfP29268 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CtgfP29268 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CtgfP29268 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CtgfP29268 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CtgfP29268 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms