Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm45058-201ENSMUST00000205810 766 ntBASIC17.91■□□□□ 0.46
Nfkb1P25799 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nfkb1P25799 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nfkb1P25799 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Nfkb1P25799 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nfkb1P25799 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nfkb1P25799 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nfkb1P25799 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.91■□□□□ 0.46
Nfkb1P25799 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nfkb1P25799 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nfkb1P25799 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nfkb1P25799 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nfkb1P25799 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nfkb1P25799 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nfkb1P25799 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.9■□□□□ 0.46
Nfkb1P25799 Gm2274-201ENSMUST00000184539 609 ntBASIC17.9■□□□□ 0.46
Nfkb1P25799 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Nfkb1P25799 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nfkb1P25799 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.9■□□□□ 0.46
Nfkb1P25799 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nfkb1P25799 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nfkb1P25799 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nfkb1P25799 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nfkb1P25799 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Nfkb1P25799 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nfkb1P25799 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Nfkb1P25799 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Nfkb1P25799 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Nfkb1P25799 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nfkb1P25799 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nfkb1P25799 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nfkb1P25799 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nfkb1P25799 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.89■□□□□ 0.45
Nfkb1P25799 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nfkb1P25799 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Nfkb1P25799 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nfkb1P25799 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nfkb1P25799 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nfkb1P25799 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nfkb1P25799 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nfkb1P25799 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nfkb1P25799 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nfkb1P25799 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nfkb1P25799 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nfkb1P25799 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nfkb1P25799 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nfkb1P25799 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nfkb1P25799 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nfkb1P25799 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nfkb1P25799 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nfkb1P25799 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Nfkb1P25799 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nfkb1P25799 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nfkb1P25799 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nfkb1P25799 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nfkb1P25799 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nfkb1P25799 Mir5130-201ENSMUST00000175160 84 ntBASIC17.88■□□□□ 0.45
Nfkb1P25799 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nfkb1P25799 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nfkb1P25799 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nfkb1P25799 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Nfkb1P25799 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nfkb1P25799 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nfkb1P25799 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nfkb1P25799 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nfkb1P25799 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Nfkb1P25799 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.87■□□□□ 0.45
Nfkb1P25799 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nfkb1P25799 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.87■□□□□ 0.45
Nfkb1P25799 Gm6659-201ENSMUST00000174752 547 ntBASIC17.87■□□□□ 0.45
Nfkb1P25799 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Nfkb1P25799 Gm7791-201ENSMUST00000219066 539 ntBASIC17.87■□□□□ 0.45
Nfkb1P25799 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nfkb1P25799 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nfkb1P25799 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nfkb1P25799 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.87■□□□□ 0.45
Nfkb1P25799 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.87■□□□□ 0.45
Nfkb1P25799 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nfkb1P25799 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nfkb1P25799 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.86■□□□□ 0.45
Nfkb1P25799 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nfkb1P25799 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.86■□□□□ 0.45
Nfkb1P25799 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nfkb1P25799 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nfkb1P25799 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Nfkb1P25799 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nfkb1P25799 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Nfkb1P25799 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Nfkb1P25799 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
Nfkb1P25799 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.85■□□□□ 0.45
Nfkb1P25799 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Nfkb1P25799 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
Nfkb1P25799 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nfkb1P25799 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nfkb1P25799 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.85■□□□□ 0.45
Nfkb1P25799 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nfkb1P25799 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nfkb1P25799 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nfkb1P25799 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nfkb1P25799 Gm18032-201ENSMUST00000222541 538 ntBASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms