Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col8a2P25318 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col8a2P25318 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col8a2P25318 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col8a2P25318 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col8a2P25318 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col8a2P25318 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col8a2P25318 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col8a2P25318 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col8a2P25318 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col8a2P25318 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.55□□□□□ -0.08
Col8a2P25318 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.55□□□□□ -0.08
Col8a2P25318 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col8a2P25318 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.55□□□□□ -0.08
Col8a2P25318 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col8a2P25318 Gm10231-201ENSMUST00000181584 441 ntBASIC14.55□□□□□ -0.08
Col8a2P25318 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col8a2P25318 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.55□□□□□ -0.08
Col8a2P25318 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col8a2P25318 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.55□□□□□ -0.08
Col8a2P25318 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.55□□□□□ -0.08
Col8a2P25318 Gm10175-202ENSMUST00000208752 441 ntBASIC14.55□□□□□ -0.08
Col8a2P25318 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Col8a2P25318 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col8a2P25318 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Col8a2P25318 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col8a2P25318 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Col8a2P25318 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col8a2P25318 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Col8a2P25318 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col8a2P25318 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col8a2P25318 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Col8a2P25318 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col8a2P25318 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col8a2P25318 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col8a2P25318 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col8a2P25318 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col8a2P25318 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col8a2P25318 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col8a2P25318 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col8a2P25318 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col8a2P25318 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col8a2P25318 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col8a2P25318 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Col8a2P25318 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col8a2P25318 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col8a2P25318 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col8a2P25318 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col8a2P25318 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col8a2P25318 Gm6433-201ENSMUST00000118634 875 ntBASIC14.54□□□□□ -0.08
Col8a2P25318 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col8a2P25318 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.54□□□□□ -0.08
Col8a2P25318 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col8a2P25318 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Col8a2P25318 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col8a2P25318 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col8a2P25318 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col8a2P25318 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col8a2P25318 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col8a2P25318 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Col8a2P25318 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col8a2P25318 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col8a2P25318 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Col8a2P25318 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col8a2P25318 Gm7638-201ENSMUST00000121348 967 ntBASIC14.53□□□□□ -0.08
Col8a2P25318 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col8a2P25318 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col8a2P25318 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.53□□□□□ -0.08
Col8a2P25318 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col8a2P25318 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col8a2P25318 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col8a2P25318 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.53□□□□□ -0.08
Col8a2P25318 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col8a2P25318 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col8a2P25318 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col8a2P25318 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col8a2P25318 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
Col8a2P25318 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col8a2P25318 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col8a2P25318 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col8a2P25318 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col8a2P25318 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col8a2P25318 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Col8a2P25318 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col8a2P25318 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.52□□□□□ -0.09
Col8a2P25318 Gm7791-201ENSMUST00000219066 539 ntBASIC14.52□□□□□ -0.09
Col8a2P25318 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col8a2P25318 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col8a2P25318 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Col8a2P25318 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col8a2P25318 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col8a2P25318 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col8a2P25318 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.52□□□□□ -0.09
Col8a2P25318 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col8a2P25318 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col8a2P25318 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col8a2P25318 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col8a2P25318 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col8a2P25318 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col8a2P25318 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms